Elusimicrobium minutum: Emin_0042
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Entry
Emin_0042 CDS
T00741
Name
(GenBank) Exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
emi
Elusimicrobium minutum
Pathway
emi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Emin_0042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emi03400
]
Emin_0042
Enzymes [BR:
emi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Emin_0042
DNA repair and recombination proteins [BR:
emi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Emin_0042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
FimL_2nd
Motif
Other DBs
NCBI-ProteinID:
ACC97610
UniProt:
B2KAR4
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All DBs
Position
complement(42942..44132)
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AA seq
396 aa
AA seq
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MSEFGNKIFTVTEISSSIKEMLEGVLNDVRVEGEISGLKKAASGHIYFDIKDENALISAV
LFKGYALRTADLKDGLKVLVRGDLSCYIKQGRYQIIVKSLVPTSVGDLYLEFERLKQKLA
AEGIFDEERKRPLPEFASRIGVVTSPTGAALQDILSVLKRRSPNLEVIISPSLVQGQEAP
AQIVKAIERLNKINPAPDVILVGRGGGSMEDLWCFNDEAVARAIYKSKIPVVSCVGHETD
FTIADFASDLRAPTPSAAAEIVAQNSAGVANYVTQLVKRMINTQNLLISLAQNRLNIAMS
NKFLKDPLFYLNQREQETDDLTALLDRAFKDKIKAADNALSMLTHKLNALSPGAVLKRGF
SIVRKQGRPVKNAEEVNKGDILDIELYKGNIQTEKI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattcggcaataaaatttttaccgttacagaaataagctcatccataaaggaa
atgcttgaaggcgtgcttaacgacgtgcgcgtggaaggggaaataagcggccttaaaaaa
gcggcaagcgggcacatttattttgatattaaagatgaaaacgcccttataagcgctgtt
ttatttaaaggctacgcccttagaacagccgaccttaaagacgggcttaaagtgcttgta
cgcggcgacctttcttgctatatcaaacagggcagataccaaataatagtaaaaagcctt
gtgcccacaagcgtgggggatttgtatttggaatttgaaagacttaaacaaaagcttgcc
gccgaaggtatttttgacgaagaacgcaaacgtcctttgccggagttcgcttcaagaata
ggagttgtaacttcacccacaggggcggctttacaagatattttgagcgtgcttaaaaga
agaagcccaaatttagaagtaattatttcaccttcgcttgtgcaggggcaggaagctccc
gcccaaatagtaaaagctattgaacggcttaataaaataaaccccgcgcctgatgttatt
ttagtggggcgaggcggcggaagcatggaagacctttggtgttttaatgatgaagccgta
gccagggcaatttataaatccaagatacccgtggtttcctgcgtggggcatgaaacggac
tttactattgccgactttgcgtccgacctgcgcgcgcctacgccaagcgccgcggccgaa
attgtggcgcaaaacagcgccggcgtggcaaattacgtaacccagcttgttaaacgtatg
attaacacgcaaaacctgcttatttctttagctcaaaacaggttaaacattgccatgtct
aacaaatttttaaaagaccctcttttttacctaaaccagcgcgagcaggaaaccgacgat
ttaaccgcgcttcttgacagggcatttaaagataaaattaaagcagcggataatgccctt
tcaatgcttacgcataaacttaacgctttaagccccggggctgttttaaaaagaggtttt
agtattgtaagaaaacaaggccgcccggtaaaaaatgccgaagaagtaaataaaggcgat
attttagatatagaactttataaaggaaatatacaaacggagaagatttaa
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