Elusimicrobium minutum: Emin_0209
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Entry
Emin_0209 CDS
T00741
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
emi
Elusimicrobium minutum
Pathway
emi03420
Nucleotide excision repair
emi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Emin_0209
03430 Mismatch repair
Emin_0209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emi03400
]
Emin_0209
Enzymes [BR:
emi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Emin_0209
DNA repair and recombination proteins [BR:
emi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Emin_0209
MMR (mismatch excision repair)
Other MMR factors
Emin_0209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
ResIII
DUF2067
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACC97771
UniProt:
B2KB12
LinkDB
All DBs
Position
221275..223635
Genome browser
AA seq
786 aa
AA seq
DB search
MSIDYLLQSLNPMQQEAVLHQNGPCLIIAGAGTGKTKTLTTRIAALIENGVNPNRILAVT
FTNKAAAQMRERVEALAPGQSGRVWIHTFHSFGVRLLRQNAHLLKLTKDFAIYDESEQKK
IITLVLQEMGQKDAKKEINQYISLISRAKDDMIDPESFAISALASNIDFKIRAAEVYKRY
QNKLNAAGALDFGDLLVKTAELLKNNEDVREYYQNIFQHILVDEYQDTNHTQYIITRTLA
YKHRNLCVVGDPDQSIYSWRGANIRNILEFEKDFPDAKIITLEQNYRSTQIILDSSNKLI
KKNKKRKDKSLYSNKTSGEPIEVRELLTEGEEARWTAQNIANLIEDGASLNDIAVFYRTN
AQSRNFEDNFRKYQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSLLRILNTPKRG
IGKTAEEKFLEYANLHNISLYQALQRSAFVEGLTPTARRAAQEFINLMDTLRLELKVTSP
TDIVNKILTLSGYWKAVEDEVEKDLEAGARLDNLQELVNAVKEYEERMARTEREASLSDF
VQEISLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLFPLSSKDDDDLEEE
RRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNLPSRFLFESGLITEEQEGPLNRQSTVMP
NYGGYKTKYGSKYGETQNRPSFKPFFAAPKKQKKYDEHGYEIEEQEGDYGAPIGCAPLGI
AGENEAPAVHVSAQGPRTGQRVRHGVFGDGKVIVIAGSGEAAKITVMFANGVKRTFMLKY
APLQLL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagattatcttttacaatcgcttaacccgatgcagcaggaggccgttttacac
caaaacgggccgtgtcttattatagccggcgcgggcacgggcaaaaccaaaactttaacg
acaaggatagccgctttaatagaaaacggcgtaaaccctaaccgcatacttgccgttact
tttacaaataaagccgccgcgcaaatgcgtgaacgcgtggaagcgcttgcccccgggcaa
agcggcagagtttggatacacacttttcacagcttcggtgtgcgtctgctcaggcaaaac
gcgcatttgttaaaacttaccaaagactttgctatttatgatgaaagcgaacagaaaaaa
ataataactttagttttgcaggaaatgggccaaaaggacgctaaaaaagaaattaaccaa
tatatttctttaatatcgcgcgctaaagacgatatgattgaccctgaaagttttgccatt
tccgctttggcttccaatattgattttaaaatacgcgcggcggaagtctacaaaagatat
caaaataaattaaacgccgcaggcgctttggattttggcgatttgcttgttaaaacggcc
gagcttcttaaaaataatgaagacgtgcgcgagtattaccaaaacatcttccagcacatt
ttagttgacgagtaccaagacaccaaccatacgcagtatattattacccgcacgcttgct
tataagcaccgcaatctttgcgtggtgggcgatccggaccaaagcatttactcctggcgc
ggcgcgaatataagaaatattttagaatttgaaaaagatttccccgacgctaaaataata
acgcttgagcaaaattaccgctccacccaaattattttagacagttccaataaacttatt
aaaaaaaataaaaaacgtaaagacaaaagcttgtattccaataaaacatcgggcgagcct
attgaagtgcgggaacttcttaccgaaggggaagaagccagatggacggcgcaaaatata
gctaatttaattgaagatggcgcaagtttaaatgatatcgccgttttttaccgtacaaac
gcgcagtcaagaaattttgaagacaattttagaaaataccagctgccttaccgtcttatc
ggcgcggtaaggttttatgaccgcagggaaattaaagatattttagggtacgcgcgcgtt
ttggttaatccgcttgataccgtgagtttgttgcgtattttaaacacgcctaaaagaggc
ataggtaaaacagcggaggaaaagtttttagaatacgccaacctgcataatatttcgctt
taccaggctttgcaaagaagcgcttttgttgaaggccttacgcctaccgcaaggcgcgcg
gcgcaggaatttattaatttaatggatactttaaggttagaacttaaagtaacaagcccc
acggatatcgttaataaaattttaacgctttctggttattggaaagctgttgaagacgaa
gtagaaaaagatttggaagccggcgccaggttagacaacttacaagaacttgttaacgct
gtaaaagagtatgaggaacgaatggcaagaacggagagagaggcgtccctttctgatttt
gtgcaggaaatttccttaattaccggagctgacgaaaagcaggattcttccgccggagcg
gttactttaatgactgtgcatttggcaaaagggttggagtttcccgtggtgtttgtaagc
gggttggaagaaggccttttccctctttcaagtaaagacgatgacgaccttgaggaagaa
cgccgcctttgttatgttgccatgacgcgcgctaaagaccgtttgtttatgacgtacaca
agcacacgcagaattttcggtaaaatgtacacaaatctaccttccagatttttatttgaa
agcggccttattacggaagagcaggaaggccccttaaaccgccaaagcacggttatgcca
aattacggcgggtataagactaagtacggctccaaatacggtgaaacgcaaaacaggcct
tcttttaaacctttcttcgcggctcctaaaaaacaaaaaaaatatgatgagcatggttat
gaaatagaagagcaggaaggggattacggcgcgcctataggctgcgcgcctttaggaata
gccggagaaaacgaagctcccgcggtacacgtttcggcgcaaggcccaagaacggggcag
cgtgtcaggcacggcgtttttggcgacggtaaagttattgtaatagcaggctccggtgaa
gcggcaaaaataaccgttatgtttgctaacggagtaaaaagaaccttcatgcttaaatac
gcgcctttacagcttttataa
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