Emergencia sp. JLR.KK010: V1225_00780
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Entry
V1225_00780 CDS
T10584
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
emj Emergencia sp. JLR.KK010
Pathway
emj03020
RNA polymerase
Brite
Enzymes [BR:
emj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V1225_00780 (rpoC)
Transcription machinery [BR:
emj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V1225_00780 (rpoC)
DNA repair and recombination proteins [BR:
emj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V1225_00780 (rpoC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWR23965
LinkDB
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Position
complement(177795..181619)
Genome browser
AA seq
1274 aa
AA seq
DB search
MTENVNKNTNNFELNNFESLQIKLASTEKILEWSHGEVTKPETINYRTLKPEKDGLFCEK
IFGPMKDWECHCGKYKRIRYKGIVCDRCGVEVTKAKVRRERMGHIKLAAPVSHIWYFKGI
PSRMGLILDITPRNLEKVLYFAAYIVTDPGDTGLGYKEILTEMQYREAKEKYGNDFKAAM
GAEAVRELLSQIDLEELSASLREKLKDASGQKKIRIVRRLEVVEALRISGNKPEWMILEV
IPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLNRLLELGAPDIIVRNEKRMLQE
AVDSLIDNGRRGRPVTGPGSRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KFYQCGLPKKMALELFKPFIMKELVEQGYAHNIKNAKRMVEKVRPEVWDVLEGVIKEHPV
MLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCTAFNADFDGDQMAVHVPLSVEAQAEAR
FLMLSINNILAPKDGSPITTPTQDMILGAYYLTYPGTCKKVEIVDGKEKVSYDKDEFNDR
KASEAHKAAGFERVPEKGDGKVFTDLDEMLMAYQDEIVDIHAKVKVRMYLDENDQRGHLV
ESTVGRFIYNQQIPQDLGFVDRNVDPYSLEVDFLCDKKKLGAIIDKCYKAHGNTGTVIML
DYIKDMGYHYSTKAAVTIGIDDMKIPDNKWDIVAESQKEVDKYEKAFRMGLISNSERYDK
VIEIWNKTTDDVADALMESLDPQNNLNIMATSGARGSKNQIRQVGGMRGLMANATGKTVE
IPIKANFREGLSILEYFISSNGARKGLADTALRTADSGYLTRRLVDVSHNVIVREFDCGT
DEGVEVRAFTDGKEVIEPLNQRIAGRTALLDIVNPQTGEIIVEQGEEISDEQAMDVVNAG
IDSVAIRSVMTCHSRTGICAKCYGRNLATGEEVNIGESVGITAAQSIGEPGTQLTMRTFH
TGGVAGSDITHGLPRVEELFEARKPKGLAEICEANGRVIDIQPRTDNKTEVIVRSDDGED
MTYVVPYGARLAVKKDDYILAGGNITSGPLNPHDILRLNGVEGVYQYLLKEVQRVYKNQG
VDINDKHVEVIVSQMLSKFKIEDAGDTDLLPGGLYSKFEIKEANEAAFAADGEPAKAKQM
LLGITKASLATNSFLSAASFQETTRVLTDAAIKGKNDKLMGLKENVIIGKLIPAGTGMKR
YKNIDVDYGVNEEFMREYTRMQEEALLEAETDVEAMDDESAEDLDLMSMPNEGIMEMDTA
LVLEPEESELIELE
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagaatgtaaataagaacacaaacaatttcgaattgaataatttcgaatcttta
cagattaaactggcttccacagaaaagattctggaatggtctcacggcgaagtaacaaag
ccggagacaattaactacagaaccctgaagccggaaaaagacggtctgttctgcgaaaag
attttcggacctatgaaggactgggaatgtcactgcggtaagtacaagagaatcagatat
aaaggtatcgtctgcgaccgctgcggtgtagaagtaacgaaagcaaaggtgagaagagag
agaatggggcacatcaaattggctgctccggtttctcatatctggtatttcaagggaatc
ccttccagaatgggactgattcttgacattacgccaagaaacctggaaaaagttctctac
tttgcggcatatatcgtaaccgatcctggcgatacaggacttggctacaaagaaattctg
actgaaatgcagtacagagaagccaaagaaaagtacggaaatgactttaaagcggccatg
ggtgcagaggcagtcagagaactgctttctcagattgatctggaagagctgtctgcatct
ctcagagaaaagctgaaggatgccagcggtcagaagaaaatcagaatcgtaagacggctt
gaagttgtagaagctctccgaatttctggaaacaagccggaatggatgattctggaagta
attccggttattccgcctgatatcagaccgatggtacagctggacggcggcagatttgca
acttctgacctgaatgatttatacagaagagtaatcaacagaaacaacagactgaaccgt
ctgttggaactgggcgcacctgatattatcgtcagaaatgaaaagagaatgctgcaggaa
gctgtagactctctgattgacaacggcagaagaggaagacctgttactggtcctggctcc
agaccgctgaaatctttgtccgacatgctgaagggtaagcagggtcgtttcagacagaac
ctgctgggtaagcgtgttgactactccggacgttctgtaatcgtagtcggaccggaactg
aaattctatcagtgcggtctgcctaagaaaatggcgctggaactgttcaagcctttcatc
atgaaagaactggttgaacagggctatgcccacaatatcaagaacgccaagagaatggta
gaaaaagtaagaccggaagtatgggatgtattagaaggtgtcatcaaagaacaccctgta
atgctgaaccgtgcaccgacgctgcatagactgggtatccaggcatttgaaccggtactg
gtagaaggtaaggcaatcaagctgcacccgttggtatgtacagcattcaatgctgacttt
gacggagaccagatggcggtacacgtaccgctttccgtagaagcacaggcagaagccaga
ttcttgatgctgtccatcaataacattctggcgccaaaggatggttccccaatcactacg
ccgacacaggatatgattctgggtgcgtactatctgacctatccgggcacctgcaaaaag
gttgaaatcgttgacggcaaggaaaaggtttcctatgataaagacgaatttaacgacaga
aaagcttctgaagctcacaaggccgcaggctttgagcgtgtaccggaaaagggcgacggc
aaagtatttactgaccttgatgaaatgctgatggcatatcaggatgaaatcgttgatatc
cacgctaaggtaaaggttagaatgtaccttgacgaaaatgaccagagaggacatctggtt
gaatccactgtgggaagattcatctacaaccagcagattccgcaggatctcggctttgtt
gacagaaatgttgacccgtattccttggaagttgacttcctttgcgacaagaaaaagctg
ggtgcgattatcgataagtgctacaaagcacatggcaatactggaactgttatcatgctt
gactatatcaaggatatgggatatcactattccacaaaggctgccgttacaatcggtatc
gacgatatgaaaattcctgacaacaaatgggatatcgtagcagaatctcagaaagaagtt
gacaaatacgaaaaagctttcagaatgggtctgatttcaaactctgaaagatacgataaa
gttattgaaatctggaacaagactacggatgatgtagcagacgcactgatggaatctttg
gatccgcagaacaatctgaacatcatggcaacatccggagccagaggtagtaagaaccag
atcagacaggtcggcggtatgcgtggtctgatggcgaacgcaactggtaagactgtagaa
attccaattaaggcgaacttccgtgaagggctttcaatcttggaatacttcatttcttcc
aacggtgctcgtaaaggtcttgccgatacagcgcttcgtacagccgactccggttatctg
acaagaagactggttgacgtatctcataacgttatcgttagggaatttgactgcggcact
gacgagggtgtggaggttagagcctttaccgacggtaaagaagtcatcgaacctttgaat
cagcgtatcgcaggaagaactgcgcttcttgacattgtaaatccgcagaccggggaaatc
attgttgaacagggcgaggaaatcagcgatgaacaggcaatggatgttgtcaacgcaggc
attgactccgttgcaatccgttccgttatgacttgtcactccagaaccggtatttgtgca
aaatgctacggaagaaacctggcaacaggtgaagaggttaatatcggtgaatctgtcggt
atcactgcggcacagtccatcggtgagccgggtacacagctgactatgagaacattccat
accggtggtgttgcaggttccgatatcacccacggtcttccgagagtagaggaattgttc
gaggctagaaagccaaagggtcttgcagaaatctgcgaggcaaacggcagagtaatcgat
attcagcctagaactgacaataagacagaggttatcgtaagaagcgatgacggagaagat
atgacttacgttgtgccttatggcgcaagacttgccgtaaagaaggacgattatatcctt
gccggcggtaacatcaccagcggtcctttgaacccgcacgatattttgagactcaacggt
gttgagggcgtatatcagtacctgctcaaggaagtgcagcgtgtatataagaaccagggt
gtagatatcaacgacaagcacgtagaggttatcgtaagccagatgctttccaagttcaag
attgaagacgcaggcgatacggatctgcttccgggtggtctgtacagcaagtttgaaatc
aaggaagcaaacgaagctgcctttgcagcagacggcgaacctgcaaaagcgaaacagatg
ttgcttggtattaccaaggcttctctggcaactaactccttcttgtctgcagcatccttc
caggaaaccaccagggttctgactgatgccgcaattaagggcaagaacgataagctgatg
ggtctgaaggaaaacgttatcatcggtaagctgattcctgcaggaaccggtatgaaacgt
tacaaaaatattgacgtggattacggtgtaaatgaggaattcatgcgtgaatatactcgt
atgcaggaagaggccctgttagaagctgaaactgacgtggaagcgatggatgatgaaagc
gcagaagatttggatttgatgagcatgcctaacgagggtattatggaaatggatacagca
ttggtgctggaaccggaagaatccgagctgattgaattagaataa
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