Emergencia sp. JLR.KK010: V1225_04935
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Entry
V1225_04935 CDS
T10584
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
emj Emergencia sp. JLR.KK010
Pathway
emj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1225_04935 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emj03400
]
V1225_04935 (uvrB)
DNA repair and recombination proteins [BR:
emj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1225_04935 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V1225_04935 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
DUF87
Kinesin
AAA_30
TrwB_AAD_bind
AAA_22
SWI2_SNF2
Focal_AT
AAA_7
Microtub_bd
T2SSE
AAA_25
FlaG
DPPIV_rep
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WWR24764
LinkDB
All DBs
Position
1042965..1044941
Genome browser
AA seq
658 aa
AA seq
DB search
MSQFKLVSEYNAMGDQPQAIDKLVSGILDGKKHQTLMGVTGSGKTFTMANIIEKVQKPTL
VISHNKTLAAQLHGEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSDINDEIEK
LRHSATAALAERRDVIIVASVSCIYGLGSPFDYENQMISLRPGMEKPRNEILRKLIDIQY
VRNDLEFERGTFRVRGDIIDIFPAGSDKAVRIELFGDEVESIKEMNPLTGEILGLRNHIA
IYPASHYVTSKENMERALVTIEDELDQRVRWFKDRGKLLEAQRIEQRTRYDMEMLREIGT
CKGIENYSRHINGLAPGTRPYTLIDYFPDDFLLMIDESHVMLPQLRAMYAGDRSRKSSLV
EYGFRLPSALDNRPLQFEEWQGLVNQAVYVSATPASYEREKAGGITAEQIIRPTGLLDPP
IEVRKTEGQIDDLIGELKQTAAKGERAFVTTLTKKMAESLTTYLTNAGIRVRYLHSEVDT
LERLEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRTETSLIQTIGRA
ARNVDGKVVMYADYISKAMKAAIDETQRRRGIQARYNEEHGITPKSVQKSVRAVIEATKP
AEDEGRYKGKKPIEMTQKELKDYVKELEKEMKDAAQNLQFERAAQLRDQIFEYKSRLS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattcaaattagtatcagaatataatgctatgggtgaccagccacaggcaata
gataagctggtcagcgggattctggacggaaagaagcaccagacactcatgggcgtcacc
ggttccggaaagacctttaccatggcgaacatcatagaaaaggtacagaagccgaccctt
gttatttctcataacaagacgctggcagctcagcttcacggtgagtttaaggagtttttt
ccagagaacgcggtagagtattttgtgtcctactacgattactatcagccggaggcgtat
gtgccgtctaccgatacctatattgagaaggattccgatatcaacgacgaaatagaaaag
ctgcgccactcggcaacagcagctttggccgagcggcgcgatgtcatcatcgtggcatct
gtttcctgcatttatggactgggaagcccttttgattatgaaaatcagatgatttcattg
cggccggggatggagaagccccgcaatgaaattttgcgcaaactgatagacatccagtat
gtccgaaacgatttggaatttgagagaggcaccttccgcgtgcggggagatatcatcgat
atctttccggcagggtccgataaggcagttcgcatagaactcttcggtgacgaggtggag
agtattaaagagatgaatccgctgacaggagaaattctgggacttaggaaccacatcgca
atttacccggcatcccactatgttacctccaaggagaatatggagcgggcgctggtcacc
atagaggatgagctggatcagagagtgcgctggtttaaggatcggggtaaactgctggaa
gcgcagagaattgagcagagaaccagatacgatatggaaatgctcagagaaatcggcacc
tgcaagggaatcgaaaactattcccgtcatatcaatggccttgcgccgggcaccagaccg
tatactttgatagactattttcccgatgattttctgctgatgatagacgagtctcatgtc
atgctgccgcagcttcgtgccatgtatgcaggggatcgatcgcggaaatcatcgttagta
gagtacggattcagactgccgtcagcgctggataacagaccgctgcagtttgaagaatgg
cagggacttgtcaatcaggcagtgtatgtcagcgccacgccagcatcgtatgagagagaa
aaggctggcggcattacagcagagcagattatcagaccgacaggtcttttggacccgccg
attgaagtgcgaaagaccgaaggacagattgacgacctgattggcgaactgaaacagacc
gctgccaaaggagaacgtgcctttgtcaccactttgaccaagaagatggcagagagcctg
acaacctatttgaccaatgctggaatcagagtcagataccttcattcggaggtggatact
ttggaacgccttgagattatcagggatttacgcctcggagagtttgacgtgctggttggc
atcaatctgctgagagagggactggatattccggaggtatcgctggtggcaattttggat
gccgacaaggaaggtttcctcagaacggagacttcactgattcagaccatcggccgtgcc
gctcgtaacgtagatggcaaggttgttatgtatgcagattatatcagcaaagctatgaag
gcggcaatcgacgagacgcagcgaagaagaggcattcaggcgaggtataacgaggaacac
ggaattacgccgaagagtgtacagaaatcagtccgcgcggtcattgaggcaaccaaacca
gcagaggatgagggcagatataagggcaagaagccgatagaaatgacccagaaggaactg
aaggattacgtaaaggaattagaaaaagaaatgaaggatgctgcgcagaacttgcagttt
gaacgtgcggcgcagctgcgtgaccagatatttgaatataagagccggctgtcataa
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