Emergencia sp. JLR.KK010: V1225_07440
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Entry
V1225_07440 CDS
T10584
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
emj Emergencia sp. JLR.KK010
Pathway
emj00550
Peptidoglycan biosynthesis
emj01100
Metabolic pathways
emj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
emj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1225_07440
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V1225_07440
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
emj01011
]
V1225_07440
Enzymes [BR:
emj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V1225_07440
Peptidoglycan biosynthesis and degradation proteins [BR:
emj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
V1225_07440
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
Beta-lactamase2
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WWR22475
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Position
1554174..1555760
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AA seq
528 aa
AA seq
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MVKRYGKRIRIIGIVGLALFLALIGRLYYIQILCGQELAAGALGQQIIKVQSVNNRGTIY
DRNMLPLTDSGCSYYYLVAEERCDAGFTLLMRKVQAEVAGSKGEGYTVYKTAVYDEEVNE
TLLTRYGAYGFCLGSRYEDTQTAAHLIGYLSGEDRTGAAGLEKMFQYRLSASSAKLLMVG
NGIGAPVPGIGVSQSQDCTVIDPAAVVTTVDSSLQKKIEEILKEKEISGAVVVMKPGSGQ
ILAMASTPGFNPNQVENYLNSGQGELVNKAVQGVYPPGSVFKIVVAAAALESGAADLTET
YNCTGKTEVNGVTLICDDHPSGHGEVDFEEAFALSCNGFFAHLAEKTGSETIVEMAQRMG
LGKTVISGFPDEESGTFPEESERRDRGLSNFAIGQGSLLVTPVQIAKMTNIIASGGVDYQ
ATLVMSMEGQSPEGTRVMTEVTAKEIAHMMEAVCEKGTASSASLHRKSAGKTGSAEAGSD
ESYTVHGWFTGYFPAENPEYTVTIIAENGKTGSRSALPVFEEIVNFLY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcggtatggaaagcggattagaatcattgggattgtaggattggctttattt
ctagcgctgattggcaggctgtattatattcagattttgtgcgggcaggaactggcggca
ggcgctttggggcagcagattataaaggtgcagtctgtcaataatcgcggcaccatttat
gacaggaatatgcttccccttacagacagcggatgcagttattattatctcgtggcggaa
gaaaggtgcgacgcgggatttactcttttgatgaggaaggtgcaggcagaagtggcaggc
tccaaaggggagggttatacggtatataagactgccgtgtacgatgaagaggtgaatgaa
acgctgcttacccgctatggcgcttatggattctgccttggaagcaggtacgaagatacg
cagactgctgctcacttaatcggctatctcagtggggaggatagaaccggtgcagctggt
cttgaaaaaatgttccaatatcgtctctctgcttcttctgcaaagcttctgatggtaggc
aatggcataggggcaccggttcctggaattggagtaagtcagagccaggactgcactgtg
attgatccggcagcagtggtaacaactgttgacagcagtctgcaaaagaaaattgaagaa
attttgaaagaaaaagaaatttctggtgcggtagtggtgatgaaaccgggatcaggacag
attttggcaatggccagtacgccggggtttaatcccaatcaggtggagaattaccttaac
tccggacagggagagcttgtcaacaaagcggtgcagggagtatatccgccaggttcagtg
tttaaaattgtagtggctgccgctgctcttgaaagcggtgcagctgatttgacggaaaca
tataattgtactggaaagacagaagttaacggtgtaacactgatttgcgatgatcatccg
agcggacatggggaagtggattttgaagaagcttttgcgctgtcctgcaacggctttttt
gcccatttagcagaaaagactggatccgagaccattgttgagatggcacagcggatgggt
cttggaaagactgtcatttccggctttcctgatgaagagtctggaacttttccggaggaa
agcgagagaagggatagagggctatcaaattttgccattggtcagggaagtctcttggtt
acaccggtgcaaatcgcaaaaatgaccaatattatcgcctctggcggagtggattatcag
gcaactcttgttatgagtatggaaggacagtcaccggagggaactagagtaatgactgaa
gtgactgccaaggagattgcccacatgatggaggcggtctgtgaaaagggaacggcttcc
agtgcaagtctgcataggaaatctgcaggaaaaaccggttctgccgaggcggggtcagat
gaaagttatacagtgcatggctggtttacaggatattttcctgcggagaaccctgaatat
acagtgactataattgctgaaaatggaaagacaggaagccgttcagcacttcctgtcttt
gaagagattgtaaattttctctactga
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