Emergencia sp. JLR.KK010: V1225_09130
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Entry
V1225_09130 CDS
T10584
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
emj Emergencia sp. JLR.KK010
Pathway
emj00260
Glycine, serine and threonine metabolism
emj00460
Cyanoamino acid metabolism
emj00630
Glyoxylate and dicarboxylate metabolism
emj00670
One carbon pool by folate
emj00680
Methane metabolism
emj01100
Metabolic pathways
emj01110
Biosynthesis of secondary metabolites
emj01120
Microbial metabolism in diverse environments
emj01200
Carbon metabolism
emj01230
Biosynthesis of amino acids
emj01240
Biosynthesis of cofactors
emj04981
Folate transport and metabolism
Module
emj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
emj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V1225_09130 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V1225_09130 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V1225_09130 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V1225_09130 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V1225_09130 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V1225_09130 (glyA)
Enzymes [BR:
emj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V1225_09130 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WWR22784
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Position
1905940..1907175
Genome browser
AA seq
411 aa
AA seq
DB search
MFNREGADNSTYNVENFEFIKKSSPVVGNLIEKEYNRQKNNIELIASENYCSEAVLAACG
SCLSWKYAEGYPYVRTSGNTSRYYGGTKFVDELEEYCCDMWRKVFDTDYHVNVQPHSGSQ
ANFAAYKAILQPGDTILSLSLDNGGHLTHGSGVNFSGKLYNMVFYDVDENGFIDMEDVRK
KAQEYKPQLILTGASAYSRIIDFAAFAEIAKEAGAYFMVDMAHIAGLVAGGAHPSPFGHA
DIVTTTTHKTLRGPRGGLIFARQDLAKKVDSAVFPYAQGGPLEHVIAGKAVCAEEALRPE
YKEYAAQVVANCKAFADEFLKLGYKIVTGGTDNHVFLLDLLEFPFSGKDLQDKLDEVGIT
LNKNCVPGEKRSPKETSGVRIGTAPMTTRGYKEEDFREVARKIDAVIKEML
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacagagaaggcgcagataacagcacctataacgtagagaattttgaatttatt
aagaaatcctctccagttgtggggaatctgattgaaaaggaatataacagacagaagaac
aacattgagctgattgcttcagaaaattattgttctgaggcggtactggctgcttgcgga
agctgtctttcctggaagtatgcagaaggctatccttatgtgagaacctccggcaacacc
agcagatactatggcggaaccaagtttgtcgacgagcttgaggaatactgctgcgatatg
tggagaaaggtatttgacaccgattaccacgtaaacgtgcagccacacagcggctctcag
gcaaactttgcagcatataaggcaattttgcagccgggagataccattttgtccctgagc
ttggataacggtggacatttgacgcatggatccggtgtcaacttcagtggaaagctttat
aacatggtattttacgatgtagatgagaatggattcatcgatatggaagacgtcagaaag
aaggcgcaggaatacaagccgcagctgattctgactggtgcttccgcttattccagaatc
atcgactttgctgcttttgccgaaattgcaaaggaagcaggggcttactttatggtggat
atggcacacattgcaggtcttgtggcaggaggtgcgcacccatctccattcggtcatgcg
gatatcgtaaccaccacaacccataagactttgagaggaccaagaggcggtctgatcttt
gctcgtcaggatttagcaaaaaaggtagacagcgcggtgttcccttatgcccagggcggt
ccgttggaacacgtaatcgcaggaaaagcagtgtgcgcggaagaagctcttcgaccggaa
tataaggaatatgcagcgcaggttgtcgctaactgcaaagcctttgctgatgaattcctg
aaactgggttacaagattgtaaccggcggcactgataatcatgtatttctattagattta
ctggaattcccgttcagcggtaaggatttgcaggataaattagatgaagtcggcattacc
ctgaacaaaaattgcgtgccaggcgagaaacgttctccgaaggaaaccagtggtgttaga
attggtacagcgccgatgaccacaagaggctacaaggaagaggatttcagagaagtagcc
agaaagattgacgcagtaattaaagaaatgctgtaa
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