Emergencia sp. JLR.KK010: V1225_12750
Help
Entry
V1225_12750 CDS
T10584
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
emj Emergencia sp. JLR.KK010
Pathway
emj00470
D-Amino acid metabolism
emj00550
Peptidoglycan biosynthesis
emj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
emj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V1225_12750 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1225_12750 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
emj01011
]
V1225_12750 (murD)
Enzymes [BR:
emj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V1225_12750 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
emj01011
]
Precursor biosynthesis
Amino acid ligase
V1225_12750 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
NAD_binding_7
2-Hacid_dh_C
Glyco_tran_WecG
Peptidase_M17_N
Motif
Other DBs
NCBI-ProteinID:
WWR23456
LinkDB
All DBs
Position
complement(2643090..2644466)
Genome browser
AA seq
458 aa
AA seq
DB search
MSGNLNNIRNKKVLIVGLGKSGIAAAQAMLRLSAEVSIQDSKKEEKIDGQLLAFLRGRGV
TCYFDRVPADMGQFDMLILSPGVSPELAFIKEAQEAGVEIIGEIEIAYRIGHGRYAAITG
TNGKTTTTTLVGEIFKAAKRKTYVVGNIGVAVISASMDAEEDAWLVTETSSFQLETTRYF
KPVVSAILNLTPDHLNRHHTMEAYGKAKAKIFENQREDGYLVINYDDKACYALAKDCKAN
IVPFSRKEELPFGAFVKDGQIVMKTKNGDIIEICAVDDLLIIGSHNLENALAAAAICYFA
GIEPKVIADTIKSFGGVAHRLEYCGEVDGVKYYNDSKGTNVDAAVTAIRAIKKDILLIAG
GDAKGQDFAELVKEFDGSIKQLILLGRDAHMIKEAAEKAGFTDFVSCKNMDECVRMAAQM
AEPGDTVLLSPACASWDMYDNFEQRGDHFKQCVSGLDR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaatttaaacaacattcgaaataaaaaagttttaatcgtaggtctgggaaaa
tcaggaattgctgcagcacaggcaatgcttcgcctttccgcagaagtttccattcaggat
tcaaaaaaggaagaaaagatagatggacagcttcttgccttcctcaggggcagaggggta
acctgttactttgacagggtgccggctgatatggggcagttcgatatgctgattttaagc
ccgggtgtgagccctgagcttgcttttatcaaggaagcccaggaagccggtgtggaaatc
ataggagaaattgaaattgcttatcgaatcggacacggtcggtatgctgcgattacagga
accaatgggaagactaccacaaccacgctagttggcgaaattttcaaggcggcgaagaga
aaaacctacgtggtcggcaatatcggtgtggctgtgatttctgcttctatggacgcagag
gaggacgcatggctggtaacggaaaccagcagttttcaactggaaaccaccaggtacttt
aagccagtggtgtcggcaattttgaatctgaccccggatcatttaaatcgtcatcatacc
atggaagcttatggaaaagcgaaagcgaagatctttgaaaaccagagagaagacggttat
ctggtcatcaattacgatgacaaagcctgttatgcgttggcaaaggactgcaaggcaaat
atcgtgcctttcagcagaaaagaagaactgccttttggcgcatttgtcaaagacgggcag
attgtcatgaaaacgaaaaatggagatataatagaaatatgcgcagttgatgatctttta
atcatcggcagtcacaatttggaaaatgcgctagcggcagcagcgatttgctattttgcg
gggattgaacctaaggtgattgcagatactatcaaaagctttggcggtgttgcccacaga
ctggaatactgcggtgaggtagacggcgtaaaatactataacgattccaagggaaccaat
gtggatgcggcagtgacagcaatcagggctatcaaaaaggatatcctgctcattgcaggc
ggcgatgccaagggacaggatttcgcagaactggtgaaggaatttgacggcagcataaaa
cagttaattcttcttggtagagatgcgcatatgattaaagaagcggcggaaaaggcggga
tttaccgactttgtaagctgcaagaatatggacgaatgtgtgcgcatggcggcgcagatg
gcagagccgggagatacggtgctgctttcccctgcttgtgcaagctgggatatgtatgat
aattttgaacaaaggggagaccactttaagcagtgtgtcagcgggttagacagataa
DBGET
integrated database retrieval system
