Mesoplasma melaleucae: EMELA_v1c01160
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Entry
EMELA_v1c01160 CDS
T05235
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
eml
Mesoplasma melaleucae
Pathway
eml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMELA_v1c01160 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eml03019
]
EMELA_v1c01160 (rnj)
Messenger RNA biogenesis [BR:
eml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EMELA_v1c01160 (rnj)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ATZ17701
UniProt:
A0A2K8NY73
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Position
119555..121318
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AA seq
587 aa
AA seq
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MSKIKFMALGGQDERGKNLYVLDIDDNLLILDAGVKYPDKGILGVDIVTPKLDYLKNNKQ
KIKGIFLTNSASYNMGAVPFILKSMDVPVYCNEITQLVGKIKISRMRIKNTKDQNFVVVK
DKQILNFGNIKVEVFRTTSASPQSYGYAFHTEEGTIVYAGDYIIDGKEQSYFSTDFNHIN
EIGKKGVLALIADSEYASRSGFTVPNHKIENFISTSFKEKKTKIAIGIFEEDIFKLGEIC
MAAKENNRKIAVYGRTMTEILNSNLINENLKIVSDDLITVEEYMESENGLLIISGTGDIL
YSKLAKIATGNDEVVEFTEKDLIILATPPAPGVEKRHAQILDELARTDARLIALSDRNIW
SMHASYEDVKVFTSMLNPKYFIPVKSLFKDSLKAEKAAIEAGVNEKNVVILDNGQVANIS
KSGISVADKKVDIGNSYVDQAGVGDVGAIVLNERKLLATDGVMIIGATIDTRNKELISMI
DTQMRGVLYIKEENPIFKIIQKEIELLLEQGQSLFKESPNKYDINEIKKDIATKVRSLIK
QESGKQPIVLVIVNEYEGKDYVFKPRNNSNRNNFKNNNNNNNKKGSN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaaatttatggcacttggtggacaagatgaacgaggaaaaaatctttat
gtcttagacattgatgacaacctactcattttagatgccggtgttaaatatcctgataaa
ggaattttaggtgtagatattgttacaccaaaactagattatttaaaaaataataaacaa
aaaatcaaaggaatttttttaacaaactcagcaagttacaacatgggagctgttccattt
attttaaaaagtatggatgttccagtttactgtaacgaaattactcaattagttggtaaa
attaaaatttctagaatgcgtattaaaaatacaaaagaccaaaactttgttgtagttaaa
gataaacaaatcttaaactttggaaatattaaagttgaagtatttagaacaacatcagct
tcaccacaatcttatggttatgctttccatacagaagaaggaactattgtttatgcaggt
gattacattattgatggtaaagaacaatcatacttttcaacagattttaatcacattaat
gaaattggaaaaaaaggtgttcttgcattaattgctgatagtgaatatgcttcaagaagt
ggtttcactgtacctaatcataaaattgagaattttatttctacttcatttaaagaaaag
aaaacaaaaattgcaattggaatttttgaagaagatatttttaaattaggtgaaatatgc
atggcagcaaaagaaaacaatcgtaagattgctgtttatggaagaacaatgactgaaatt
cttaattcaaacttaatcaatgaaaacttgaaaatagtttcagatgatttaatcacagtt
gaagaatacatggaatcagaaaatgggttattaattatttcaggaacaggagatatactt
tattcaaaactagcaaaaattgctacagggaatgatgaagttgttgagtttactgaaaaa
gatttaattattttagcaacacctccagcacctggtgttgaaaaaagacatgctcaaatt
cttgacgaattagcaagaacagatgcaagattaattgctttaagtgatagaaacatttga
tcaatgcatgcatcatatgaagatgtaaaagtttttacaagtatgttaaatccaaaatac
tttatcccagttaaatcattatttaaagattcattaaaagctgaaaaagctgcaattgaa
gctggagttaatgaaaaaaatgttgtgatattagacaatggacaagttgctaatatttca
aaatcaggaatttctgttgctgacaaaaaagttgatattggtaattcatatgttgaccaa
gcaggagttggagacgttggagcaatagttttaaatgaaagaaaactattagcaactgat
ggtgtaatgattattggagcaactattgatacaagaaataaagaattaatttcaatgatc
gatactcaaatgcgtggagttttatatattaaagaagaaaatccaatttttaagatcatt
caaaaagaaattgaattacttttagaacaaggacaaagtctatttaaagaatcaccaaat
aaatatgatataaatgaaattaaaaaagatattgcaacaaaagttagatcattaattaaa
caagaatcaggtaaacaaccaattgtattagttatcgtaaatgaatatgaaggaaaagac
tacgtttttaaaccaagaaataattcaaatagaaataactttaaaaataataataataat
aataataaaaaaggatcaaattaa
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