Mesoplasma melaleucae: EMELA_v1c03850
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Entry
EMELA_v1c03850 CDS
T05235
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
eml
Mesoplasma melaleucae
Brite
KEGG Orthology (KO) [BR:
eml00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EMELA_v1c03850 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eml03021
]
EMELA_v1c03850 (rpoD)
Transcription machinery [BR:
eml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EMELA_v1c03850 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ATZ17946
UniProt:
A0A2K8NWM6
LinkDB
All DBs
Position
358925..360346
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AA seq
473 aa
AA seq
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MKKYMDKKEIAKIKTIEDFYDATVNYAKSNNNEITSEEVQMSFSKIFANATDNEYEKLLE
DLQSKGIQFTDLDDIDIHEDIDLDEEIETDDDVELSDDDAYADELIGERKGPGRRPKDAG
TTKYRVGSISNETKIQDLIKTYFSTIGQTKILTKDQEIVYAKLANSEDLEERKEGRDMLI
TSNLKLVISVARKHLNRGLDFADLIEEGNIGLIKAVDKFDYEKGFKFSTYATWWIRQAIT
RAIADQARTIRIPVHMVETINKLSRIERQLTQELGREPSSQEVAERMGGDMIAEKVVEIK
KIAVEPVSLEKPFGDEDDTHFGDFVEDKDMISPTDFTEKEILREVIDKVFEDMPAREEKV
IRMRYGIVPTKVRTLIRLAEECNDETAEELAKAIKKLDIHLETPVEKIRTVDSKIIQQHL
LKYEDSKTLEEVGKELNVTRERIRQIEAKTIRKLKQPTNTNKSGKVLKEFYKG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatacatggataaaaaagaaattgcaaaaattaaaacaattgaagacttttat
gatgcaactgttaattatgcaaaaagtaataataacgaaataacatcagaagaagttcaa
atgagttttagtaaaatctttgcaaatgcaactgataatgaatatgaaaaattattagaa
gatttacaatcaaaaggaattcaatttactgatcttgatgatattgatattcatgaagac
attgaccttgatgaagaaattgaaactgacgatgatgttgaattatcagatgatgacgct
tatgctgatgaattaattggtgaaagaaaaggaccaggcagacgaccaaaagacgccggt
acaactaaataccgtgttggttctatttcaaatgaaacaaaaattcaagatttaattaaa
acatacttttcaactattgggcaaactaaaattttaactaaagaccaagaaattgtttat
gcaaaattagcaaattcagaagaccttgaagaaagaaaagaaggaagagatatgttaatc
acttctaacttaaaattagttatttcagtagcaagaaaacacttaaacagaggattagac
tttgctgatttaattgaagaaggaaatattggattaattaaggctgttgataaatttgat
tatgaaaaaggatttaaattctcaacttatgctacatgatgaattcgtcaagcaattaca
agagcaattgctgatcaagctagaactattagaattccagttcacatggtagaaacaatt
aacaaactatctagaattgaaagacaattaactcaagaattaggaagagaaccatcatct
caagaagtagctgagagaatgggtggagatatgatagctgaaaaagttgttgaaatcaaa
aaaatagctgtagaacctgttagtttagaaaaaccatttggtgatgaagatgatactcac
tttggagatttcgttgaagataaagatatgatttctccaacagactttactgaaaaagaa
attttaagagaagtaattgataaagtatttgaagatatgccagctagagaagaaaaagtt
attcgtatgagatatggaattgttccaacaaaagttagaacactaattagattagctgaa
gaatgtaatgatgaaactgctgaagaattagctaaagcaattaaaaaattagatattcac
ttagaaacaccagttgaaaaaattagaactgttgatagcaaaatcattcaacaacactta
ttaaaatatgaagattcaaaaactttagaagaagttggaaaagaactaaatgttacaaga
gaaagaattagacaaattgaagctaaaactataagaaaattaaaacagcctactaataca
aataaatcaggtaaagttttaaaagaattctataaaggataa
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