Mesoplasma melaleucae: EMELA_v1c07760
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Entry
EMELA_v1c07760 CDS
T05235
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
eml
Mesoplasma melaleucae
Pathway
eml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EMELA_v1c07760 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eml03019
]
EMELA_v1c07760 (rnj)
Messenger RNA biogenesis [BR:
eml03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EMELA_v1c07760 (rnj)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ATZ18263
UniProt:
A0A2K8P045
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All DBs
Position
707639..709405
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AA seq
588 aa
AA seq
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MEKEIIISTNQILEKEDFEPFVFKQKEVQRKYIKTESPTKVFALGGLEEIGKNTYCIEHE
NEIIMIDAGVKFPDDSMLGINAVIPDYSYLKENEKKIKALFITHGHEDHIGGIHYLVKQV
NIPVIYAPELAAALIRDRLKEHKLTDKTIVKEYVADDVWATKNLRVSYAALNHSIPDAFG
ILVETPNGNIFSTGDYKFDWSPLGHFAELSKLASMGDKGIELLMADSTNAEVEGYTPGEK
GIMENIDKLFLKAKGRIFITTFASNVHRIQQIVELANKYDKKVVILGRSIERIIKIIRQM
GHLKINDKMFIKANDIEKYPANKIMIISTGSQGEPMAALSRIATNRHQSISIIPGDTVIF
SSSPIPGNRADVEILINRLTRIGANVIESSLSNRIHTSGHASQEEQKLLFTLLRPNYFMP
MHGEFRMLKKHIETAESVNLESGHGFVMANGDQLELLQGKASIGKRIDADAIYVDGKDMT
AHASNIIRERDILSKDGLISVVVSIDSQTNKLLCTPRIISRGSFYVKDSGNIISEAITIV
TESINEVLNSSKPTFGAIKKAIKQSLSPYIFKTKRRNPLIIPVILNKK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaaataataatttcaacaaatcaaattcttgaaaaagaagattttgaacct
tttgtttttaaacaaaaagaagttcaaagaaaatatattaaaacagaatctccaactaaa
gtatttgctttagggggacttgaagaaattggtaagaatacttactgtatagaacatgaa
aatgaaatcataatgattgatgctggggtaaaattcccagatgattcaatgttaggaatt
aatgcagttattcctgattactcttacttaaaagaaaatgagaaaaaaattaaagctcta
tttattactcatggacatgaagaccacattggtggaattcactacttagtgaaacaagtt
aatattcctgttatttatgcaccagaattagctgctgcattaattagagacagattaaaa
gaacacaaactaactgataaaacaattgttaaagaatatgttgcagatgatgtttgagca
acaaaaaacttacgtgtaagttatgctgctttaaaccactcaattccagatgcgtttgga
attttagttgaaactccaaatggaaacattttctctacaggagattataaatttgactga
tcacctttaggacactttgctgagttaagtaaattagcaagtatgggtgataaagggatt
gaacttttaatggctgattcaacaaatgcagaagttgaaggttatacacctggtgaaaaa
gggattatggagaacattgataaattgttcttaaaagctaaaggaagaatctttattaca
acttttgcttctaacgttcaccgtattcaacaaattgttgaactagcaaacaaatatgat
aaaaaagttgtgatcttaggtagatcgattgaaagaattattaaaataattcgccaaatg
ggtcacttaaaaattaatgacaaaatgtttattaaagcaaacgatattgaaaagtaccct
gcaaacaaaataatgattatctctacaggtagtcaaggtgagccaatggctgcattatca
agaattgcaacaaatagacaccaatctatttcaatcattcctggtgatactgtaatattc
tcttcatcaccaattcctggaaatagagctgatgttgaaattttaattaatagattaaca
cgtattggtgctaatgtgattgaatcatcactatcaaatagaattcatacttcagggcat
gcaagtcaagaagaacaaaaactgttatttacactattaagacctaactactttatgcca
atgcatggagaattcagaatgttaaaaaaacatattgaaacagctgaatcagttaactta
gaatcaggtcatggatttgtaatggcaaatggtgatcaattagaattactacaaggtaaa
gcaagtattggaaagcgtattgatgctgatgcaatctatgttgatggtaaagacatgaca
gcacatgcttcaaatattattagagaacgtgacatattaagtaaagatggattgatttca
gttgttgtatcaattgattctcaaactaataaattattatgtacaccaagaattatttca
cgtggaagtttttatgtaaaagattcaggaaatattattagcgaagctattacaattgtt
actgaatctattaatgaagttttaaattcatctaaaccaacttttggagcaattaaaaaa
gcgatcaaacaatcactttctccttatatctttaaaacaaagcgtagaaaccctttaatt
attcctgttatattaaacaaaaaatag
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