Exiguobacterium marinum: PTI97_00090
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Entry
PTI97_00090 CDS
T08845
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
emm
Exiguobacterium marinum
Pathway
emm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTI97_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emm03019
]
PTI97_00090
03009 Ribosome biogenesis [BR:
emm03009
]
PTI97_00090
Enzymes [BR:
emm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTI97_00090
Messenger RNA biogenesis [BR:
emm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PTI97_00090
Ribosome biogenesis [BR:
emm03009
]
Prokaryotic type
rRNA helicases
PTI97_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
NAT10_TcmA_helicase
AAA_30
SWI2_SNF2
UvrD-helicase
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
WDH75971
UniProt:
A0ABY7WYM6
LinkDB
All DBs
Position
complement(14354..15799)
Genome browser
AA seq
481 aa
AA seq
DB search
MNKQQFTDYRLSDEITRALGIMKYESPTEVQQQVIPRALEREDLIVKAQTGSGKTAAFGI
PVIELIDWAENKPQVLVLTPTRELAVQVREDMTNIGRFKRIKATAVYGKEPFSKQREELK
QKTHIVVGTPGRVMDHIERETLSLDRIEYLIIDEADEMLNRGFLADVEKILQQLPNERVT
MVFSATFPQDIERLCQKHMNAPARVAIESTGMTASTIEHRLLPVHRNEKLAVLQDITVVE
NPDSCMIFCRTKENVDTVYAELDKAGYSAERLHGGLEQEDRFAVMNGFKMGNFRYLVATD
VAARGIDVDNVELVINYDVPVEKESYVHRTGRTGRAGKQGTAITLMTRQEERLIGAIESY
VQFEIPMIDAPTEAEVAANQDAFEQKLSGRRVVRNNKTARINQDIMKLHFSGGKKKKLRA
VDFVGTIAKIPGVSADDIGIITINDQMTYVDILNGKGSIVLQAMETTPVKGKKLKVSKAH
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacagcaatttactgattatcgcctgagcgacgagattactcgcgcgctaggc
attatgaaatacgaatcacctaccgaagtacaacagcaggtcatcccgcgtgcgctcgaa
cgcgaagacttaatcgtcaaagcacagacgggaagcggaaagacagctgctttcggaatt
ccggttatcgagctcatcgactgggctgaaaataaaccccaagtgctcgtcttgacaccg
acacgcgaactcgctgttcaagtccgcgaagacatgacgaacatcggacgtttcaaacga
atcaaagcgactgccgtctacgggaaagaaccgttctcgaaacagcgtgaagagttgaag
caaaagacacatatcgtcgtcggtacgccaggtcgcgtcatggaccacatcgagcgcgag
actctttcactcgatcgaatcgaatacttgatcatcgatgaagcggatgaaatgctcaac
cgcggcttcctcgctgacgtcgagaaaatccttcagcaactgccaaacgaacgtgtgacg
atggtcttctcagcgacgttcccacaagatatcgaacgcctctgtcagaagcatatgaat
gctcctgcgcgtgtcgccatcgagtcgaccggcatgaccgcttcgacaatcgagcaccga
ttactcccggttcaccggaatgagaaactggctgtgcttcaagacatcacggtcgtcgag
aacccggacagctgtatgattttctgtcgaacgaaagaaaacgtcgatacagtgtatgct
gaactcgacaaagccggttactccgctgaacgtctccacggcggactcgagcaagaagat
cgcttcgccgtcatgaacggattcaagatgggcaacttccgttatcttgtggcgacagac
gtcgcagcgcgtggaatcgatgtcgataacgtcgagctcgtcatcaactatgacgttcct
gtcgaaaaagaaagctacgtgcaccggacaggtcgtaccggacgtgccggcaaacaaggg
acggccatcacgctcatgacccgtcaggaagagcgcctcatcggagccatcgaatcttac
gttcaattcgagattccgatgattgatgctccgacagaagcggaagtagcggctaatcaa
gatgcctttgagcaaaagttgagcggacgacgtgtcgttcgcaacaacaagacggctcgc
atcaatcaagacatcatgaagctccatttcagtggcgggaagaagaaaaaacttcgtgcc
gtcgacttcgttggaacgattgccaaaatccctggagtatccgctgacgacatcggcatc
atcacaatcaacgaccagatgacgtacgtcgatatcctcaacggaaaaggttcgatcgtc
cttcaggcgatggaaacgacgccggtcaaagggaagaaacttaaagtaagcaaagctcat
aaataa
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