Exiguobacterium marinum: PTI97_06545
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Entry
PTI97_06545 CDS
T08845
Name
(GenBank) DNA-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
emm
Exiguobacterium marinum
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emm03019
]
PTI97_06545
Messenger RNA biogenesis [BR:
emm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PTI97_06545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WDH77171
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All DBs
Position
1269472..1270650
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AA seq
392 aa
AA seq
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MNYYQQIDPIIGTSTNQERFRIPQIEKSKERLDRLQDGAPVQTKALVSTVEVKEGKSGAK
WLQLSVTTATGMMRAKHWLRGNESELLPIYESGVIELSGKIDIYPKPDGAKSIIIDRVHP
ISKDEAISLLPGLPGDETMEQFADELFSLIDTLSPTYQQIAYGLLDFVWDDFVLSPAALY
HHHNYAGGLLKHTVCMLRLGYRIQEQDDYLAMVFRVIKEAEQLHKVDLWNTMNGVKIEQA
YKGTFESLYAACEAMAERKEPLNWDELALGILFHDIGKIYEYSHLLSSPNRFEKLSPVEG
TSETTGISINPIGTLIGHMPYGGLLFEETLRQSKIRLPIDVHHRIWHMILSHHGKREWGS
SVLPMTTEAWMLHLIDLLDARYEKWARAHEEL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaactattaccaacagattgatccgatcataggtacttctacgaaccaagaaagattt
cgaatacctcaaattgaaaaatcgaaagaacgtttagaccggttacaggacggcgcacct
gtccagacgaaagcgcttgtcagtacggttgaagtgaaggaagggaagagcggtgcgaag
tggctacaactaagtgtcacgacggcgaccgggatgatgcgcgcgaaacattggctccgt
gggaacgagagcgaattacttccgatctatgagtctggcgtgattgaattgtcaggaaaa
atcgatatctatccaaaaccagatggtgcaaaatcaatcattatcgaccgggttcatccc
atctcaaaagatgaagccatctctttactgcctggcttaccgggtgacgaaacgatggaa
caatttgctgatgagttattcagcttaatcgatacgttgtcgccgacttatcaacagatc
gcctatggtctccttgatttcgtttgggatgatttcgtactgtcgccagcagcgctttac
catcatcataattacgctggaggattgctgaagcatacagtttgcatgttacgtctcgga
tatcggattcaagaacaggatgactatttggccatggtgttccgtgtaatcaaagaagcc
gagcagttgcataaagtcgacctttggaatacgatgaacggggttaaaattgaacaggcc
tataaaggaacgttcgaatcattgtatgccgcatgcgaagcgatggcagaacggaaagag
ccattgaactgggacgaactcgcacttggaatccttttccacgacatcggaaaaatatat
gaatacagtcatctgctatctagtccgaatcgttttgagaaactatctcctgttgagggt
acaagtgaaacgaccggcatctcgatcaacccgattgggacattaattgggcatatgcca
tacggtggcctgttgttcgaagagacgttacgccaatcaaagattcgactgccgatcgac
gttcatcatcgtatttggcatatgattttatcgcatcacgggaagcgtgagtggggatca
agtgtcttgccgatgacgacggaagcttggatgcttcatttgattgatttattggatgcg
cgctatgagaaatgggctcgcgcacacgaagaattgtaa
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