Exiguobacterium marinum: PTI97_08625
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Entry
PTI97_08625 CDS
T08845
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
emm
Exiguobacterium marinum
Pathway
emm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PTI97_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emm03400
]
PTI97_08625
Enzymes [BR:
emm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PTI97_08625
DNA repair and recombination proteins [BR:
emm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PTI97_08625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WDH77353
UniProt:
A0ABY7X3K7
LinkDB
All DBs
Position
complement(1664161..1665063)
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AA seq
300 aa
AA seq
DB search
MLKIGSHVSVSGKKMLLAGSEEAVSYGANTMMVYTGAPQNTRRKPIEDLNIEAALKHMSA
HDIEEIVVHAPYIINLGNTTKPETFELAVSFLTQELKRAEALQAARHVVLHPGAHVGAGE
EVGLARIIEGLNEVLTGDEQVKIALETMAGKGSELGKTFEELATIIDGVTHNDRLSVCFD
TCHVHDAGYDLVGDLDGVIEEFDRIVGIDRLGVLHVNDSKNVRGAKKDRHENIGYGEIGF
DTLNRIVHHEAFAHLPKILETPYIPISEKTKIAPYKQEIEMFRANQFDSEWRDQFTLAHQ
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaataggttcacacgtttcggtatcaggtaaaaagatgttacttgcaggtagt
gaagaggccgtttcgtacggggcgaatacgatgatggtgtatacaggtgccccccaaaat
acacgacgtaaaccgattgaagatttgaacatcgaggcggccctgaagcatatgtcggca
cacgacatcgaggagattgtcgtacatgccccgtatatcatcaatctcggaaatacgaca
aagccagagacgttcgagttggccgtttcctttttgacacaggaattaaaacgggctgaa
gcactacaagcagctcgtcacgttgtcctccaccctggggcacatgtcggcgcaggagaa
gaagtcggtctcgcccgaatcattgaaggactaaatgaggtactgacgggtgacgaacaa
gtgaaaatcgcgctggagacgatggcaggaaaagggagcgaactcggaaagacgtttgaa
gagcttgcgactatcatcgacggcgtaacacataatgatcgtctgtccgtttgctttgat
acgtgtcacgttcatgacgctgggtatgatttagtcggtgatttagacggtgtaatcgaa
gaattcgatcgcatcgttggaatcgatcgtctcggcgtacttcatgtgaatgattcgaag
aatgttcgcggtgcgaaaaaagaccgtcatgaaaacatcggatatggcgagattggattt
gatacattaaatcgtattgttcatcatgaggcattcgcacatctaccaaaaattttagag
acaccatatatcccaatcagtgaaaaaacgaaaattgctccatacaaacaagaaattgag
atgttccgtgcgaatcaatttgattctgaatggcgtgatcaattcacgctagctcatcaa
taa
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