Exiguobacterium marinum: PTI97_12235
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Entry
PTI97_12235 CDS
T08845
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
emm
Exiguobacterium marinum
Pathway
emm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTI97_12235 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emm03021
]
PTI97_12235 (rpoE)
03400 DNA repair and recombination proteins [BR:
emm03400
]
PTI97_12235 (rpoE)
Transcription machinery [BR:
emm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PTI97_12235 (rpoE)
DNA repair and recombination proteins [BR:
emm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PTI97_12235 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
DUF8073_C
Motif
Other DBs
NCBI-ProteinID:
WDH75586
UniProt:
A0ABY7X102
LinkDB
All DBs
Position
complement(2420789..2421268)
Genome browser
AA seq
159 aa
AA seq
DB search
MNKSLIDFVYELLQETGEQPVSFDEIREKIKQNYTFASEEEELEKIAQLYTDLNIDGLFV
NLGANRWALRVWYPFDKSDEDLVIEARQRGELDEFEEEFEEADEGIVDIEDDLDVFAKVE
DYDSTEFDDAGEQEKVDGLDDFKDDDLDDDLDLEDEDDL
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcgttgattgatttcgtttatgaacttctccaagaaactggcgagcagcct
gtttcttttgatgagattcgcgaaaagatcaagcaaaattatacgtttgcgagtgaagag
gaagagctcgagaaaatcgcacaactttacaccgatttgaacatcgacgggttgttcgtc
aacttgggtgcaaaccgctgggcgcttcgcgtatggtatccattcgacaagtcggatgaa
gatctcgtcatcgaagcacgtcaacgtggtgaacttgatgaattcgaagaagagttcgaa
gaggcagacgaaggtatcgtcgacatcgaagatgacttggatgtattcgcaaaagttgaa
gattacgattcaactgaatttgacgatgcgggcgaacaagaaaaagttgatggcctagat
gacttcaaggatgatgatttggacgacgacctcgatctcgaagacgaggatgatttataa
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