Exiguobacterium marinum: PTI97_13475
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Entry
PTI97_13475 CDS
T08845
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
emm
Exiguobacterium marinum
Pathway
emm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTI97_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emm03021
]
PTI97_13475
03400 DNA repair and recombination proteins [BR:
emm03400
]
PTI97_13475
Enzymes [BR:
emm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PTI97_13475
Transcription machinery [BR:
emm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PTI97_13475
DNA repair and recombination proteins [BR:
emm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PTI97_13475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SpoIVA_ATPase
DUF961
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WDH75814
LinkDB
All DBs
Position
complement(2643283..2644227)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDATFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTAVQIDG
VLHEFSTIDGVVEDVTQIVLNLKKLALKVYSEEEKTLEINVSSAGAVTAADITHDSDVEI
LNPELYIATLADNATLRMRLTARRGRGYVQAEDNKRDDMPIGVIPIDSIYTPIQRVNYEV
DKTRVGQDASFDKLLLDVWTDGSIRPEEAVSLGAKILTEHLNIFVGLTDEALNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEEMMKVRNLGRKSLEEVQ
HKLDELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccaaagatcgaaacggtcgaaatcagcgaggacgctacgttt
ggtaaattcgtagtagaaccgcttgaacgtggatatggcactactctcggtaactcacta
cgtcgaattctattgtcatcgctcccaggtgcagcggtaacagcggttcaaatcgatggc
gtgcttcacgagttctctacgattgacggtgtcgtcgaagacgtcactcaaatcgtacta
aacctcaagaagttagcactaaaagtgtactcggaagaagagaaaacgcttgagattaac
gtttcaagtgccggtgctgtcactgcggcagacattacccatgatagcgacgttgaaatc
ttgaatcctgagctctacatcgcgactctcgctgacaatgcgacgcttcgcatgcgtttg
actgctcgccgtggtcgtggttacgtccaggcagaagataacaaacgtgatgatatgccg
attggtgtcattccaatcgattcgatctatacaccgattcaacgcgtgaactacgaagta
gacaaaacacgtgtcggtcaagacgctagcttcgataagcttttattagacgtgtggaca
gatggttcaattcgtccggaagaagctgtatcattaggggctaaaattttgacggaacac
ttgaacatcttcgttggtttgacagatgaagctctcaatgcagaaattatggtcgagaaa
gaagaagaccaaaaagaaaaagtactcgaaatgacgattgaagaactcgatctctcagtt
cgttcgtacaactgcttgaagcgcgctggcatcaacactgttcaagaactcgcaaacaaa
tcagaggaagagatgatgaaagttcgtaacctcggacgtaaatcactcgaagaagttcaa
cacaagttggacgaactcggtttgggcttgcgtaaagaagactaa
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