Elizabethkingia anophelis FMS-007: M876_05110
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Entry
M876_05110 CDS
T03946
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M876_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emn03400
]
M876_05110
DNA repair and recombination proteins [BR:
emn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M876_05110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M876_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
AAA_24
AAA_23
AAA_14
Viral_helicase1
AAA_33
SLFN-g3_helicase
AAA_18
NACHT
cobW
AAA_30
NTPase_1
NB-ARC
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AKH93945
LinkDB
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Position
complement(1080925..1083717)
Genome browser
AA seq
930 aa
AA seq
DB search
MAHQDNIDIKKEIFVKNAHLNNLKHIDVSIPKNKLTVITGVSGSGKSSLAFDTIYAEGQR
RYVESLSSYARQFLGKLEKPKIDDIKGLAPSIAIQQKVISSNPRSTVGTTTEIYDYLKLL
FARVGRTYSPVSGEEVRKDSVTDVIDFVKAQKKAPTLILRAPWHYESENFAEQLKTLKLQ
GFTRLEIGGNVASIEDLESFGFVPEAGTEIFLVIDRFKYEDDETFLQRLADSIQMAFYEG
KGYCSIKNADNGKIREFSNKFELDDIVFNEPNIHFFSFNNPYGACPTCEGYGKIIGIDED
LVVPNKNLSVYEDAVAPWRGETMKEWKAAFIKKVAKDFPIHKPYFQLTKEQRQFLWRGDK
SANFPGVDNFFKMLEENLYKIQYRVMLSRYRGKTTCPTCEGLRLREESSWVKIDGHNIQS
MVELPLDELLPLIQSLNLNEHDAAIAKRLVYEIVSRLEFLVKVGLGYLTLNRNSNTLSGG
ESQRINLATSLGSSLVGSIYILDEPSIGLHSRDTENLIEVLKNLRDLGNTVIVVEHDEDV
MRAADHIIDIGPEAGYLGGEVVFSGDFEEIKKANTLTSDYLNGVEEIAVPKHRRKPKEFI
HIKGARENNLKNVDVDIPLESLVVVTGVSGSGKSTLMKDVLAQAVQIELELGGKKADFDS
ITFPKKLIQNIEMIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQKMSKHMGLKAKHFSFN
VDGGRCDECKGEGVITVSMQFMADIELQCETCHGTRFKDEILDVKFDEKNISDILNLTVN
EALDFFRDNHQDKIVQKLKPLQDVGLGYLQLGQSSSTLSGGEAQRVKLASFLVKGTSHDK
TLFIFDEPSTGLHFHDINKLMISLQALVNLGHSVIVIEHQPDIIKCADYIIDIGPEAGKY
GGKIVFAGTPEELIKNKTSHTARFIEEKLK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccaggacaatatagatattaaaaaagagatttttgttaaaaacgcccatctc
aataatctaaaacatattgatgtttccatcccgaaaaataagcttaccgttatcacggga
gtttccggtagtggtaaatcttccttagccttcgacactatttatgctgaaggccaaaga
cgttatgtagaaagcttaagttcctatgcccgacagtttctcggaaagctggaaaaacca
aagatagatgatattaaagggcttgctccttcaatcgctattcagcaaaaggtaatctcc
tctaacccgcgttctacagtaggaacaactacagagatatacgattatcttaaattatta
ttcgctcgagttgggcgcacttactctcctgtatccggagaagaagtaagaaaagacagc
gttaccgatgtcatagactttgttaaagctcagaaaaaagcacctacacttattttacgt
gcaccatggcattatgaatccgaaaattttgcagaacagcttaagactttaaaattacaa
ggttttacaagactcgaaatcggcggaaatgttgccagcattgaggatttggaaagcttt
ggatttgtacctgaagcaggaactgagatatttctggttatcgaccgctttaaatatgaa
gatgatgaaactttcctgcagcgtttggcagactctatacagatggctttttatgaaggt
aaaggctattgttctatcaaaaatgctgacaacggaaaaatcagagaattttcgaataaa
ttcgaactggacgatattgtttttaatgaacccaacattcattttttcagctttaacaat
ccttatggtgcatgccccacctgtgaaggttatggaaagataataggtatagatgaagac
cttgtggttcctaataaaaacctgtcggtttatgaagatgcagtggcaccttggcgtggc
gaaaccatgaaagaatggaaagcagcttttataaaaaaggtagccaaagatttcccaata
cacaaaccgtattttcagcttaccaaagagcagcgtcagtttttatggcgcggtgataaa
tcggcaaatttccccggtgtagataatttctttaaaatgcttgaagaaaatctttacaaa
atccagtaccgtgtaatgctttcccgctacagaggaaaaacaacatgtccgacatgtgaa
ggattacgcttaagagaagaaagctcctgggtaaaaattgatggtcataatatccagtct
atggttgaattaccattagacgaattattaccacttattcagagcctgaatctaaacgag
cacgatgccgctattgccaaaagattggtatacgaaattgtttcgcgtttagaattttta
gtaaaagtaggtttaggttatctaacccttaaccgtaattcgaatactctgtccggtgga
gaaagtcagcgtattaatctggcaacctctttaggaagcagtttagtcgggtctatttat
attctggatgaacctagtatcggacttcactcccgcgataccgaaaatcttatagaagta
ttaaaaaatctccgtgatttagggaatactgttattgtggtagaacatgatgaagacgta
atgcgtgctgcagatcatattatagatataggtccggaagcaggttatttaggtggtgaa
gtagtatttagtggtgactttgaagaaataaaaaaagcaaatacactgacttctgattac
ctaaatggtgttgaagaaatcgctgtaccaaagcacagaagaaaaccaaaggaatttatt
catataaaaggagccagagaaaacaatcttaaaaatgttgatgtagatatcccattagaa
agcttagttgtagtaacaggtgtttcgggaagtggaaaatctacattaatgaaagatgtt
ctggcacaggccgttcagatagaactggagttaggaggtaaaaaagcggattttgattcg
ataacattcccgaaaaagctgattcagaatatcgaaatgattgaccagaatccaatcgga
aaatcatcccgttccaatcctgtgacttatctgaaagcttatgatgatatacgtgatctt
tttgctaaacagaaaatgtccaaacatatgggactgaaagcaaaacatttctctttcaat
gtggatggtggccgttgtgacgaatgtaaaggtgaaggtgtaatcacagtttccatgcag
tttatggcagatatagaattacaatgtgaaacctgccacggaacccgttttaaagacgaa
attctggatgtaaaattcgacgaaaagaatatctcggacattctcaatcttacggtaaac
gaagctttagatttcttcagagacaatcaccaggataaaattgttcagaaactaaaaccg
cttcaggatgtaggattaggctatcttcagttagggcagtcctcttctactctttccgga
ggagaagcacaaagagtaaaattggcatctttccttgtaaaaggcactagtcacgacaag
actttatttatattcgatgagccttctacaggtctccatttccatgatatcaacaagtta
atgatttcgttacaggcgctggttaatcttggccattctgttattgtgattgagcatcag
ccggatattattaaatgtgcagactatattatcgatataggcccggaagcaggtaaatat
ggtggtaaaattgtatttgcaggaactcctgaagaactgataaaaaacaaaacctcacat
accgcaaggtttattgaggagaaactaaaataa
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