Elizabethkingia anophelis FMS-007: M876_05255
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Entry
M876_05255 CDS
T03946
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M876_05255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emn03019
]
M876_05255
Messenger RNA biogenesis [BR:
emn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M876_05255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
SwrA
UPF0242
KH-I_KHDC4-BBP
NGO1945_C
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
AKH93973
LinkDB
All DBs
Position
1109805..1111376
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AA seq
523 aa
AA seq
DB search
MTTTIIIVGILCLVIGALVGFLLSKSSLNSKARFIIEDAKKSAENLIEKANVQAESIKKE
KNVQAKEKFLELKAEHDNNIQQREKKMQEAEKRTKDKENKLNDELSKVGKLEKDLTRQNQ
DLEKKIEQMEIRQQELAAATAQKVELLQKISGYSADEAKAELVEAMKGEAKSKAQAYVTN
VMDEAKLNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVNKTTKQIEE
EIIEVGKRTILDLGIHGLHPELVKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKFGENPEVINAIGAHHDEIEMTSLLS
PIIQVADAISGARPGARRQVLESYMQRLKDLEAAALSFDGVSSAFAIQAGRELRVMVESG
KVNDDVAAQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccactatcatcattgtcggcattttatgcctcgttataggagcactggttggc
tttttactatcgaaaagttcgctaaactccaaagccagatttattattgaagacgccaaa
aaaagtgcagaaaaccttatagaaaaggcaaatgtacaggcagaaagtataaagaaggaa
aaaaatgtacaggctaaagaaaaatttcttgaattgaaagccgaacatgacaacaatatt
cagcagcgtgaaaagaaaatgcaggaggctgaaaaaagaacaaaggataaagaaaacaag
cttaatgatgagctttctaaagtcgggaagttagaaaaagatcttacccgtcagaatcag
gatctggaaaagaaaattgagcaaatggagatccgccagcaggaattagctgccgctact
gctcagaaagttgaattattacaaaagatttcaggttattcggcagatgaagctaaggct
gaattggtagaagcgatgaaaggagaagctaaatccaaagcacaggcttatgtgaccaat
gtaatggatgaagcaaaactaaatgctaaaaacgaagctcgtaagattgttattcagacc
atccaaagaattggtacagagcaggcgattgaaaactctgtttctgtattcaacattgaa
tccgatgaaattaaaggtagaattatcggacgtgaaggacgtaacatcagagctttggaa
gctgctacaggagtagaaattattgtagatgatacgccggaagctattttgctttcatgc
ttcgatccggtaagaagagaaattgcaagattatctttacaccgcctggtaacggacgga
cgtattcaccctgcaagaattgaagaagttgtaaataaaacaacaaaacaaatcgaggag
gaaattattgaagtaggtaagagaacaatcttagatttaggaattcatggtctccacccg
gaattagtgaagattgttggtagaatgaagtatcgttcttcatacggacaaaacttatta
cagcactccagagaagtagcaaatattgctgctacaatggctgcagaactaggactaaat
gttaagctggctaagagagcaggtttattacacgatataggtaaagttccggagcaggaa
tcagaacttccacacgcacttttaggaatgcagtgggcagagaagtttggtgaaaatcca
gaagttattaatgcgatcggagctcaccacgatgaaatcgagatgacttctctgttatct
ccgattattcaggtagccgatgctatttcaggagcaagacctggtgcaagaagacaggta
ttggaatcttatatgcagagacttaaggaccttgaagctgcagcattaagcttcgacgga
gtatccagtgcatttgcaattcaggcaggtagagagcttcgtgtaatggtagaaagcggt
aaagtaaatgacgatgtagctgcacagctttcctatgatatctctgagaaaattcagaat
gagttaacttatccgggacaggtaaaagtaacggtaatccgtgaaacaagagctgtaaat
atcgcaagataa
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