Elizabethkingia anophelis FMS-007: M876_05470
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Entry
M876_05470 CDS
T03946
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M876_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emn03019
]
M876_05470
03009 Ribosome biogenesis [BR:
emn03009
]
M876_05470
Enzymes [BR:
emn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M876_05470
Messenger RNA biogenesis [BR:
emn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M876_05470
Ribosome biogenesis [BR:
emn03009
]
Prokaryotic type
rRNA helicases
M876_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKH94015
LinkDB
All DBs
Position
complement(1158310..1159992)
Genome browser
AA seq
560 aa
AA seq
DB search
MNLFTETNLSPEILKAIGELGYESPTEIQKQTIPFISSDIRDLIALAQTGTGKTAAFSLP
ILDMVDDTSRKIQFLVLCPTRELCLQITKDIKNYSKYLPNIKTVAVYGGSSINDQIRSLR
EKPQIIVGTPGRVIDLINRKSLDFSNIHWLVLDEADEMLSMGFKDDLETIISETPETKQT
FLFSATMSKEVERISKNYLTKPHRISVGSINEVKKNIKHEYYVVGYRQKKEALKRLIDNN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISIALIKPEESRKLKQIKSQ
SKIEINEKVIPTGKEIIKAQVEGVFEKLFSEHENYFEFDASLIPDLSNFTKEELVGQLLQ
FQLRDMALYYENRNDIAEQKFNGRDDSERGSRRERSRDRDRDRGDRNSRDRGDRKSRKKS
ENMVRFFFNLGKRDELKKVDVLDIINQSTKKSGKKADIGDIEILEKFTFFEVEKSFKNEV
MGNINNKKFKGREMRLEVAN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttaccgaaaccaatttaagtcctgaaattctgaaggctattggtgaacta
ggctacgagagccctactgaaatccagaaacaaacaataccctttatatcatcggacatc
agagaccttatcgctctggcgcagacgggtaccggaaaaactgcagctttttcccttcca
attttggatatggtagatgacacaagccgcaaaatccaatttttggtattgtgtccaacg
cgcgaattatgtcttcagattacaaaagacataaaaaactactctaaataccttcctaac
attaaaactgttgccgtatatggtggtagcagcattaatgaccaaatcagatctcttcgt
gagaaaccacaaattattgtgggtacaccgggacgtgttatcgatttgatcaatcgtaaa
tctttggatttttccaatattcactggttggtattagacgaagcagatgaaatgctttca
atgggcttcaaagatgacttggaaacaatcatcagtgaaactccggaaaccaaacagact
ttccttttctcagcgacaatgagcaaggaagtagaacgtatttctaagaattacttgact
aaaccgcacagaatttctgtaggttctattaacgaggttaagaagaacattaaacatgaa
tattatgtagtaggataccgtcagaaaaaagaagctttaaaaaggcttattgacaataac
ccgaatcaatattctattattttctgccgtacgcgtatggaaactcaggaagttgccgat
ttccttatgcagaatggttatgcagcagatgcacttcacggtgacctttctcaggcacag
cgtgatactgtaatgaagaagttccgtttaaagaatatcgacatcctggttgctaccgac
gttgctgcaagaggactagatgtagattctttaactcacgttatccatttctctttacca
gacgatcctgaagtatttgtacacagaagcggtagaactggtagagcaggaaaagatggt
atatcaattgctttaatcaaacctgaagaaagccgcaagctgaagcaaattaagagtcaa
agtaagattgagattaacgaaaaagtaattcctaccggaaaagaaatcatcaaggctcag
gtagaaggtgtttttgaaaaattattctctgaacacgaaaattattttgaatttgatgct
tctttaattcctgatctttctaactttactaaagaagaacttgttggtcagctattacag
ttccagcttcgtgacatggcattatactacgaaaatcgtaatgatattgctgagcagaag
tttaacggccgagatgattctgagagaggaagcagacgtgagcgtagccgcgacagagac
agggacagaggagacagaaacagcagagaccgtggagatcgtaaatcgagaaagaaaagt
gaaaacatggtacgtttcttctttaacctaggaaagagagatgaactgaaaaaagtagac
gtattggatatcatcaaccagtctactaaaaaatcaggtaaaaaagctgatatcggagat
attgaaatcttagaaaaattcacattcttcgaagtagaaaaaagcttcaaaaatgaagta
atgggtaacattaacaacaaaaaattcaaaggcagagagatgcgtttggaggttgctaac
taa
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