KEGG   Elizabethkingia anophelis FMS-007: M876_08390
Entry
M876_08390        CDS       T03946                                 
Name
(GenBank) RNA polymerase sigma factor rpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
emn  Elizabethkingia anophelis FMS-007
Pathway
emn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:emn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M876_08390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emn03021]
    M876_08390
Transcription machinery [BR:emn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M876_08390
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r1_2 PgaD Sigma70_r4_2 DUF6285 DUF7443
Other DBs
NCBI-ProteinID: AKH94583
LinkDB
Position
complement(1774052..1774957)
AA seq 301 aa
MIVAHNSWVSIYTMRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVDLAQKIRAGD
RVALEKLIKANLRFVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAV
WWIRQSILQALAEQSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEE
DIKESMKNSGRHLSMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLT
PREADLVRLYFGLNGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNSRSKILKSYLG
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgattgtagcccataattcgtgggtgagtatttatactatgagacaacttaaaattacc
aagcaggttaccaacagggaaactgcatcgttggacaagtaccttcaggaaatcggaaaa
gtagaattgattacagctgatgaagaggtagatttagcacagaaaattcgcgcaggagac
agagtagctttagaaaaattaattaaagctaaccttcgtttcgtggtttctgtatctaaa
cagtaccagaatcaaggactttctcttcccgatttgattaacgaagggaatcttggtttg
atgaaagctgcgaaacgttatgacgagaccagagggtttaagtttatttcttatgcggta
tggtggattcgtcagtctattcttcaggcattggcagaacagtcaagaattgttcgtctt
cctttaaacaagattggttctattaataaaattaataaagcctacgctcacttagagcag
gaaaatgaaagaccgccttcaccagaagaattggcagaagtattagacatgagtgaagag
gatattaaggaatctatgaaaaactcaggtcgtcacctttccatggatgctccattagtt
gaaggtgaagattctaacctttacgacgttcttcgctcaggtgaatccccttctccggat
aaagatttgatgcttgaatctctgcagattgaaatagaaagagcattgaatactttgaca
ccaagagaagctgatttggtaagattgtacttcgggctaaacggtaaacatcctatgact
cttgaagagatcggagaaacatttgatctgaccagagaacgtgtacgtcagattaaagaa
aaagctattaagagattaaagcataacagcagaagtaaaattcttaaatcttatttagga
aaataa

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