Elizabethkingia anophelis FMS-007: M876_08405
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Entry
M876_08405 CDS
T03946
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M876_08405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emn03400
]
M876_08405
DNA repair and recombination proteins [BR:
emn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M876_08405
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M876_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
ATPase_2
AAA_25
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AKH94586
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Position
1776118..1778943
Genome browser
AA seq
941 aa
AA seq
DB search
MENTDFIEVYGAREHNLKDINVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETF
SAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTSKNPRSTVGTVTELYDFLRLLFARVSD
AYSADSGDKMIGYSEEQILEAIRESYSGQKILLLSPVVRSRKGHYRELFAQYSKKGYLQA
RVDGEIIDIEPDLKLDRYKTHDIEIVVDRLIIGESASEARIQKSLSTALHLGEGIVMIQK
FGEDNFRYFSKNLMDAVTGESIPLPEPNTFSFNSPKGSCPTCKGLGNIKKINTDFFVENP
KLSINQGALLPLEDIKNNKWLLTQIKSILELYDLDLSTPFNKIPEEALELIYNGCHQDIV
KDLKHAGISKKIKINFEGLIPFLEQVVEDKESYEATLIERHFTTDEVCPDCHGARLQPSS
LQFKIDGKNISEVSALSLSELQEWLEEVKDKFSEKNKIIAHEILKEIQSRLGFLLDVGLD
YLSLSRATRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKNLRD
IGNSVIVVEHDKDMILEADHVLDIGPKAGKFGGEILWQGKPDELIKADTITADYITGKRK
IEIPAERRKGNGKSIVLKGAKGNNLKNVNLEVPLGQLVVVTGISGSGKSSLINGTLYPIL
NRHFYRSVQEPLPYKSIEGIDNIDKIVDVDQSPIGRTPRSNPATYTGVFTDIRNLFAELP
EAKIRGYKPGRFSFNVKGGRCETCQGAGLKLIEMHFLPDVYVHCETCNGKRFNRETLEVR
YKGKSISDVLDMTINEAVEFFQPIPKIFAKVKTLQDVGLGYITLGQQSTTLSGGEAQRIK
LATELAKKQTGNTLYILDEPTTGLHFEDVKVLLNAIEQLVDMGNSFIIIEHNMDVIKMAD
HIIDIGPEGGKHGGKIVAEGTPEQIIKNKNSLTAKFLKKEL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacagatttcattgaagtgtatggtgcccgcgagcacaacctgaaagacatt
aacgtaaaaattccacgtaacgaattggttgttattacagggctttccggtagtggaaaa
tcgtcactggcttttgatacaatatttgcagagggtcaaagaagatatatcgaaactttt
tcagcctatgcccgacagtttttaggtggattagagcgtcctgatgtcgacaaaattgaa
ggcttatctccggttattgctatcgaacagaaaacaacatctaaaaacccacgttccacg
gtaggtacagttacggaattgtatgacttcctccgtttactctttgcaagagtttcggat
gcttattcagcagattccggagataaaatgattggttactctgaagaacaaattctggag
gctattcgcgaaagctatagtggtcaaaaaatactattactctctccggttgtaagatcc
agaaaaggacattaccgtgagctttttgctcaatattctaaaaaaggttatctacaggcc
agagtagatggtgagataatcgatatagaaccagatctaaaacttgacaggtacaaaacc
catgatatagaaatcgttgtagaccgccttattataggagaatctgcttctgaagcaaga
attcagaaatcattgtctacagcattacatttgggtgaaggaattgtcatgattcagaaa
tttggagaagataacttcagatattttagtaaaaatcttatggatgcggtaacaggggag
tctatacctttgccggaacctaatactttttcttttaactctccaaagggtagctgccca
acctgtaaaggacttggaaatatcaagaagattaatacagacttttttgtagaaaatcct
aagctttctattaatcagggggcgttattaccacttgaagatattaagaataataaatgg
ttgcttactcagatcaaatctattttagagctttatgatctggacttatccacacctttt
aataaaattccggaggaagcattagagcttatatacaatggttgccatcaggatattgta
aaggatctgaagcatgccggaatcagtaaaaagattaaaataaactttgaaggtcttatt
ccttttctggagcaggttgttgaagataaagaaagctatgaagcaacattaatagaaaga
cattttacaactgatgaagtatgcccggactgtcatggggcaagattacaaccttccagc
ttacaatttaaaatagacggtaaaaatatttcagaagttagtgctctttcactttccgaa
cttcaggaatggctggaagaagtaaaagataaattctctgaaaagaataaaattatcgct
cacgaaattctgaaagaaattcagagtcgtttaggctttcttttggatgtaggattagat
tatttaagtctgagccgtgcaacccgaaccctttccggaggagaatctcagcgtatccgt
ttggcaacgcagataggctctcaattggtaaatgttctctatattctggatgaaccatct
attggtcttcatcagcgtgacaatgaaagacttatcaactctcttaagaaccttagagat
ataggtaattccgttattgtggtagaacacgataaagatatgattcttgaagccgaccat
gtactggatattgggcctaaagcaggaaagttcggtggagaaattctatggcagggaaaa
ccagatgaactgataaaagcagatacgataaccgctgactatattaccggtaagagaaaa
atagaaattcctgcagaaagaagaaaaggaaacggtaaatccatcgtcttaaaaggagca
aaagggaacaatcttaaaaatgtaaatcttgaagtaccattagggcaactggttgtggta
acaggtatctccggaagtggaaaatcctctctgattaacggaacgctatatcctattctt
aacagacatttctacagaagtgtgcaggagcctttaccatataagagtattgagggaata
gataatatcgacaagattgtagatgtagatcagtctccaatcggaagaactccacgttcc
aaccctgcaacctataccggagtatttacagatatacgaaacctttttgcagaacttcct
gaggccaaaatacgtggttataaaccaggaagattctcttttaacgtaaaaggcggaaga
tgtgaaacctgccagggtgcaggactaaagcttattgaaatgcatttccttccggatgtt
tatgtacactgtgaaacatgcaatgggaaacgcttcaacagagaaacactggaggttcgt
tacaaaggaaaatctatttccgatgtgctggatatgactattaacgaggctgtggaattc
ttccaaccaataccaaagatctttgcaaaggttaaaaccttacaggatgttggtttaggt
tatattaccttaggccagcagtctacaacgctttccggtggagaagctcaacgtataaag
ctagctactgaactggctaaaaaacaaaccggaaatacactttatatattagacgaacct
actaccggacttcattttgaggatgtaaaggtcttgctaaatgcaatagagcagctggta
gatatggggaactctttcatcattatagaacacaacatggatgttataaaaatggcagac
catattattgatataggaccggaagggggtaaacatggaggtaagattgttgcagaagga
actcctgaacagattattaaaaacaaaaacagccttacagctaaatttttgaaaaaagaa
ttgtaa
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