Elizabethkingia anophelis FMS-007: M876_10030
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Entry
M876_10030 CDS
T03946
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
emn
Elizabethkingia anophelis FMS-007
Pathway
emn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M876_10030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emn03019
]
M876_10030
03400 DNA repair and recombination proteins [BR:
emn03400
]
M876_10030
Enzymes [BR:
emn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M876_10030
Messenger RNA biogenesis [BR:
emn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M876_10030
DNA repair and recombination proteins [BR:
emn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M876_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AKH94901
LinkDB
All DBs
Position
complement(2134721..2136928)
Genome browser
AA seq
735 aa
AA seq
DB search
MNTKSANIAESLKKYFGFTTFKGYQEQIISSLLEGSDVFVLMPTGGGKSLCYQLPALMSE
GTAIVVSPLIALMKNQVDAVNGLSSEEGVAHVLNSSLNKTQTKTVMDDIRNGRTKLLYVA
PESLIKEEYIDFFKEVPISFFAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMTNALVYKESFNRPNLFYEVRPKVNIDKEIVKFIKAQNGKSGIVY
CLSRRKVEEFAQLLQVNGLNALPYHAGLDAKTRVANQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCIAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYLLYYFGEKFDPINGAGAKMCDNSVNPPVLKDASEDLTKI
LSLVNDLGQKFRAKDLVAVIAGKENAVTKSYKLENNTYFGSGKDKEDNYWKSIIRQAVVQ
DFLLKDIETYGVLKLTKKGLDCIDGKLKSKFEIAEDRVYNLAETAKISSEVTLGNTARGL
DDKLFSLLKEVRKKVAQKNNIPPYTVFQDPSLEDMTVQYPISIDEISKIYGVGEGKAKKF
GKEFADFIKNYVEENDIDRPDDMVLKQVANKSSHKVFIIQNTDKKIDLEDIAKAKNLTMD
ELLSEMESIVYQGTKLNIDYYIDENFDEDIVEGFMEFMMESESDSMKTLCTEFSDELSDE
EIRMLRIKFISDVAN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaatctgcgaacatagcggagtcattgaaaaagtattttggatttacaaca
ttcaaaggatatcaggaacaaattatatcttcacttttagaaggaagtgatgtttttgtt
ttgatgccaacaggtggaggtaaatcattatgctaccagttgccggcattaatgagcgag
ggaacagctattgtggtttcaccactaatagcactaatgaaaaatcaggtagatgcggtt
aacgggctttcttctgaagagggagtagcacacgttctcaattcttcgttgaacaaaact
caaacgaaaactgtgatggatgatatccggaacgggaggacaaaactactttatgtagct
ccggaatcgctgattaaagaagagtatatagacttcttcaaagaagttcctatttcgttc
ttcgcaatagacgaggcacactgtatttctgaatggggacacgacttccgcccggagtac
agaaacctgaaaagtattatcgataaaattgcggatgttcctgttattgcgctgacagcc
acagcaaccccgaaagttcaggatgatattcagaaaacacttggtatgacgaatgctctg
gtgtataaagaatctttcaacagacctaacttgttttatgaagtacgtcctaaagtaaat
atcgataaagagattgttaaatttatcaaagcccaaaatggtaaatcagggattgtttac
tgtctcagcagaagaaaagtagaagaatttgcacagctgctacaggtaaatggtcttaat
gcactgccataccatgccggtttagatgccaaaacacgtgttgccaatcaggataaattc
ctaatggaagaggtggatgttattgtggcgactattgcatttggaatggggattgataaa
ccggatgtacgttttgtgattcattacgatatacctaagagcttagaaagttattaccag
gaaacaggacgtgccggaagagatggtggagaaggacattgtatagctttctatgatcca
aaagatattgagaagctggagaagtttttagcacagaaaccggtttcggaaagagagatt
gggttacaactgcttaacgaagtagtgggatatgttgaaacatctatgagccgacgtcag
tacctgttatactattttggtgaaaaatttgatccaataaatggagcaggtgctaaaatg
tgtgataattcagttaatccgcctgtattaaaagatgcaagtgaggatttgacaaaaatt
ctgagtctggttaatgatctgggacaaaaattcagagcgaaagatctggttgctgtaatt
gccggtaaagaaaatgcagtaacaaaatcgtataaacttgaaaataatacctatttcgga
agtggaaaagacaaagaagataattattggaaatccattatccgacaggctgtagtacag
gattttttattaaaagatattgaaacctacggtgtattaaagcttacaaaaaaaggactg
gactgtatcgatggtaagctgaaatcgaaatttgaaatagcagaagacagagtatataat
ctggcagaaactgctaaaatatcttctgaagttacattaggtaatacagcacgcggactg
gatgataaattgtttagcctgctgaaagaagtaaggaaaaaagtagcccagaaaaataat
atcccaccatatactgtatttcaggatcccagtttggaagatatgacagtacaatatcct
attagtatagatgagatttctaaaatctatggggtaggagaaggaaaggctaagaaattc
gggaaggaatttgcggattttataaaaaattatgtagaagaaaacgatatcgaccgcccg
gacgatatggtattaaagcaggtagcaaataaatccagtcataaagtttttattattcag
aatacggataagaaaatagatctggaagatattgcgaaagctaaaaacctgacaatggat
gaacttctttccgaaatggagagtatcgtttatcagggaacgaaactaaatatcgattac
tatatcgatgagaattttgatgaggatatcgtagaaggttttatggagtttatgatggag
tctgagagcgatagtatgaagactttgtgtactgaattttctgacgaactttccgacgag
gaaatccgaatgctgcgaataaaatttattagcgatgtagcgaactaa
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