Elizabethkingia anophelis FMS-007: M876_18315
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Entry
M876_18315 CDS
T03946
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
emn
Elizabethkingia anophelis FMS-007
Brite
KEGG Orthology (KO) [BR:
emn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emn03032
]
M876_18315
03400 DNA repair and recombination proteins [BR:
emn03400
]
M876_18315
Enzymes [BR:
emn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M876_18315
DNA replication proteins [BR:
emn03032
]
Prokaryotic type
DNA Topoisomerases
M876_18315
DNA repair and recombination proteins [BR:
emn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M876_18315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
EF-G-binding_N
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AKH96511
LinkDB
All DBs
Position
complement(3925079..3927619)
Genome browser
AA seq
846 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGNDFEVTSSMGHIRDLPKKGMGINLETFTPDYEVSPDKK
KLVTELKSLAKKADMVWLASDEDREGEAIAWHLAEELKLKDDKTKRIVFHEITKNAILKA
IENPRKIDNNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLVVEREKE
IHSFQSQASYKVEGTFLNDEKKEILAKLKKDFTTEKEAESFLNQCSTAEFKVLNVEKKPG
QRSASAPFTTSTLQQEASNRLGYSVTSTMRVAQRLYEEGYITYMRTDSVNLSQEAINSAK
TTIIKEFGEEYSAPRNYTTKNASAQEAHEAIRPTDFGVKTVGDAQLNKLYQLIYKRAMAS
QMANAKIEKTVIEIGNQKLPQHFEATGEVIIFDGFLKVYGITKNEEEEDDNDDKLLPKVN
IGEALKYKKIIATEKYTKAPARYTEASLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
VIAKEREIVQLTLTSSLKKETLTEKYGADKNKFLPTDIGVVVNDFLVNNFNEVLDYGFTA
RVEEAFDIIAEGNRAWKDVMTEFYGKFHPRIADVEENADRATGDRVLGVDPKTGKNVHAR
IGRFGAMIQIGETDDEEKPIFASLMPNQNISTITFEEAMELFKIPFNLNDYEGKEVIVGV
GRFGPYIKWGDAYISIPKTEDPLSVDNDRAIEIIEEKKRADAPIATYKGEPVTKGTGRFG
PFIKYKDIFVNVPKKYDFNNLSQSDINELIDAKLEKEANRYIQQWEDQKVSLENGRWGPF
IRFGKKMLKIPLKGKGEKYTAEDLQDISFDEVKKWIIAQDETAFKEKPKAKKATAKKTTA
KKPSKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatctcgtaattgtggagtcccctgcgaaggctaagacgatacagaagtat
cttggtaatgactttgaagtaacctctagtatgggacacatccgtgatcttcctaaaaag
ggcatgggtatcaatcttgaaacatttactcctgattacgaagtttctccagataagaag
aagctcgttacagagcttaagtctttagccaaaaaagccgatatggtttggctggcttcc
gatgaagaccgcgagggggaagctattgcgtggcatctggcggaagaactgaaattgaaa
gatgataagactaaaagaattgtatttcatgaaatcaccaagaatgctattcttaaagct
atagaaaatccgagaaaaatagacaataatcttgtcaatgcacaacaggcaagaagagta
ttggatagaattgtaggttttgaaatgtctcctgtgttatggaaaaaagtgaaacctggc
ctttctgcaggacgtgtacagtctgtagctgtacgtctggttgtagaaagagaaaaagaa
attcatagtttccagtctcaggcttcttacaaagtagaaggtactttccttaatgacgag
aagaaagaaattttagctaagttaaagaaagatttcactacggaaaaggaagctgaatct
ttccttaatcagtgtagtactgcagagttcaaagttttaaatgtagagaaaaagccgggt
caacgttcagcttcagctccgtttaccacttctactctacagcaggaagcttcaaacaga
ttaggatattctgtaacttctacaatgcgtgtggcacagcgtctgtatgaagaaggttac
attacttatatgagaacagatagcgttaatctttctcaggaagctatcaattcagctaaa
acaactattataaaagaatttggtgaggaatattcagcaccgagaaattataccactaag
aatgcatctgctcaggaagcgcacgaagcaattcgtcctactgattttggtgtaaaaaca
gtaggtgatgcacaacttaataaattataccaactaatctataaaagagcaatggccagc
cagatggctaatgctaaaatagagaaaacagtaattgaaattggaaaccagaaacttcct
cagcattttgaggcgactggtgaggtaattattttcgatggattcttaaaagtatatggt
attactaaaaatgaagaggaagaagatgataacgatgacaaacttctgccaaaagtaaat
atcggagaagctcttaaatacaaaaagattatcgctaccgagaagtatacaaaagctccg
gcaagatatacagaagcttctctggtgagaaaactggaagaattgggaatcggaagacca
tctacttatgctccaactattcaaactattcagaaccgtgaatatgtagataaaagagaa
gttatagctaaagaacgtgaaatcgttcagcttacactaacctcttctttgaaaaaagaa
acacttaccgaaaagtatggtgctgataagaataaatttttaccaactgatataggagtt
gttgttaatgacttcttagtaaataactttaatgaagttcttgactacggatttacggct
cgtgttgaagaagcttttgatattattgcagaaggaaacagagcatggaaagatgtaatg
accgagttctatggaaaattccatccaagaattgcagatgtagaagaaaatgctgaccgt
gcaaccggagaccgcgtattgggcgtagaccctaaaacaggtaaaaatgtacatgccaga
atcggaaggtttggtgctatgatccaaattggagaaactgatgatgaagagaaaccaatc
tttgcttctctaatgcctaatcagaatatttctacgattacatttgaagaagcaatggag
cttttcaaaataccttttaatcttaacgattatgaaggtaaagaagttatagttggtgtt
ggacgctttggaccttatatcaaatggggagacgcttatatcagtattcccaaaactgaa
gaccctttgtctgtagacaatgacagggctattgagattatagaagaaaaaaagagagct
gatgctcctattgcaacctataaaggtgaacctgtaacaaaaggaaccggaagattcgga
cctttcattaaatataaggacatctttgtaaatgttccgaagaaatatgatttcaataat
ctttctcaaagtgacatcaatgaattaattgatgccaaactggagaaagaagctaacaga
tatattcagcaatgggaggaccagaaagtctccctagaaaatggaagatggggacctttc
attcgttttggaaagaaaatgctaaaaattccattgaaaggaaaaggggaaaaatacact
gctgaagatcttcaggacatttccttcgatgaagtaaaaaaatggataatagctcaggac
gaaactgcttttaaagaaaaaccaaaagcaaaaaaagcaactgcaaagaaaaccactgct
aaaaaaccttctaaaaaataa
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