Entomomonas moraniae: DM558_00065
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Entry
DM558_00065 CDS
T06727
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
emo
Entomomonas moraniae
Pathway
emo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM558_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emo03019
]
DM558_00065
03009 Ribosome biogenesis [BR:
emo03009
]
DM558_00065
Enzymes [BR:
emo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DM558_00065
Messenger RNA biogenesis [BR:
emo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM558_00065
Ribosome biogenesis [BR:
emo03009
]
Prokaryotic type
rRNA helicases
DM558_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
TrkA_N
AAA_19
AAA_22
HEM4
DUF3256
Motif
Other DBs
NCBI-ProteinID:
AZS52121
UniProt:
A0A451EQK0
LinkDB
All DBs
Position
complement(12545..14338)
Genome browser
AA seq
597 aa
AA seq
DB search
MTQKNNSFAELGIHPSVLAAITAAGYEEPSPIQSKAIPEILAGQDIIGQAQTGTGKTAAF
ALPILSKIDPNNRHTQVLVLAPTRELALQVADAFETFAKLMPTVKVAAIYGGAPMGAQLR
AIRQGVQVLVATPGRLCDHLRRDNNFLSEVKFLVLDEADEMLKLGFMDDLESIFKTLPAK
RQTALFSATVPASIKAIAEKQLNNPKNIKIVTKTQTVERIEQSYLMVHPDQKNTAVLRLL
EVEDFDAVIAFVRTKQATLDLATELEIKGYRVAALNGDIAQNQRERVVESLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRTGKALLLVTPRERRMLQTI
ERVTKQEVSEASLPDAQNILVARIKRLTKNLQPFAAPQKNQEHYLELIKQLQGDLDCSLE
DLAIALLRRASSRRPITVEEIEKTEPKLTPVSSKPDSREPRERRGRGERKERGERAERGE
RKERAERGERKERGERGERKERSSRGERRDNGNDRISEGKVRCRTPVGSLDGVAAKNLLG
AILNEAGINKDQIGKITIRDSFSLVELPEKGLDSILSKLKETRVAGKPLKLRRYRED
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaaaaacaactcctttgctgagcttggtattcaccctagtgtattagcagct
attactgccgctggctacgaagaaccatctcccatacaaagcaaagccatacctgaaatc
ctagctggtcaagatattattggtcaagctcaaacaggtacaggtaaaactgctgccttt
gctttacctattctaagcaaaattgaccccaataatcgtcatacacaagtgcttgtatta
gcgcctacaagagagctggctttacaagtagctgacgcattcgaaaccttcgctaaatta
atgcctactgtaaaagtagccgctatttatggtggtgcacctatgggagcacaactacga
gctattcgccaaggcgtacaagtattagttgcaacaccggggagactttgtgaccattta
cgccgcgataacaatttcttgtcagaagttaaatttttagtactagatgaagctgatgaa
atgttaaagctcggctttatggatgaccttgaaagcatttttaaaacattacctgctaag
cgccaaacagctctattttcagcaactgttccagcttctattaaagccatcgctgaaaaa
caattaaacaatccaaaaaatattaaaatagttacaaaaacacaaaccgtagaacgtatt
gaacaaagctacttaatggtacatcctgatcaaaaaaatacagccgtacttcgtttatta
gaagtagaagattttgatgcagtgatagccttcgtacggactaaacaagccactctcgat
ttagctaccgagttagaaatcaaaggttatcgtgttgctgcactcaatggcgatattgca
caaaatcaacgtgagcgagttgtagagtcattaaaagatggccgcctcgatattgttgtt
gcaaccgacgttgccgcacgaggtttagatgtaccccgtatcactcacgtctttaacgtc
gacatgccatatgaccctgaatcttatgtacaccgtattggtcgtacgggccgtgcaggt
cgcacaggaaaagcattactcctcgtaacacctcgcgaacgtcgtatgctacaaacaatc
gaacgtgttactaaacaagaagtaagtgaagcaagcttaccagatgctcaaaacatttta
gtcgctagaattaaacgccttactaaaaatttacagccttttgctgcgccacaaaagaac
caagaacattaccttgaactcattaaacaattacaaggtgatttagactgttcactcgaa
gatttagctattgccctactacgacgtgcaagtagccgtcgccctattacagttgaagag
attgagaaaactgagccaaaactcactcctgttagcagtaagcctgatagtagagagccc
agggaacgtagaggccgcggcgaaagaaaggagcgtggtgagcgcgcagaacgtggtgaa
agaaaagagcgcgcagaacgtggtgaaagaaaagagcgtggtgagcgcggagaaagaaaa
gaacgtagttctcgcggtgaaagacgagataatggaaacgatagaatttctgaaggcaaa
gttcgttgccgtacgcccgttggtagtctagatggtgttgcagctaaaaacttattaggt
gctatactcaatgaagcaggtattaataaagaccaaattggaaaaatcactatccgtgat
agttttagtttagttgaattacctgaaaaaggtttagacagtattttatctaaacttaaa
gaaacacgtgttgcaggtaagcctttaaaactaagacgttaccgcgaagattag
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