KEGG   Entomomonas moraniae: DM558_00115
Entry
DM558_00115       CDS       T06727                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
emo  Entomomonas moraniae
Pathway
emo02020  Two-component system
emo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:emo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DM558_00115
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DM558_00115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emo03021]
    DM558_00115
Transcription machinery [BR:emo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DM558_00115
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21
Other DBs
NCBI-ProteinID: AZS49276
UniProt: A0A3Q9JJW9
LinkDB
Position
24302..25807
AA seq 501 aa
MKPTLALKIGQQLSMTPQLQQAIRLLQLSTVDLQQEIQEILESNSMLEQQEPGEEFDDNN
LLAEENILVNPSSQEISFKDHNHDNENTISTDDRNQVSSTDVIPEELPVDTNWDDIYQSS
LPASHNDSEESDFTTYTSEGETLQTHLLWQLNVAPLTDRDKTIAINIIDCINEDGYLEES
ITDICEGLDASLEVEADEVEMMLHYIQQFDPVGIGARDLKECLLLQLNGLFTEHTYYQGA
KELVTTWLDVLASKDYTKLMRLTKLKEEELRQVIGLVQCLNPKPGSQIESKEPEYIVPDV
IVRKNNDHWIVELNQEAMPKLRVNAQYASYVQRANNSSDNQFLKNQLQEARWFIKSLQSR
NETLMKVATQIVEHQRGFLEYGEEAMKPLILSEVADVVGMHESTISRVTTQKYMYTPRGI
YELKYFFSSHVNTSEGGECSSTAIRAMIKKLIAAEDSKKPLSDSKLTSLLEEQGVQVARR
TVAKYREALGIGSSSERKQFI
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaagccaaccttagcgttaaagataggacaacaactgtcaatgacaccccagttgcag
caagcaattaggcttttgcaattgtctactgttgatttacaacaagaaattcaagaaata
ctagaatctaactctatgttagagcagcaggaacccggtgaggagtttgatgataacaac
ttattggcagaagaaaatatactggttaatccgtcgagccaagaaattagtttcaaagat
cataatcatgacaatgaaaatacgataagcactgacgatagaaaccaagtttcatcaact
gatgttattcctgaagagctccccgttgatactaattgggatgatatttatcaaagtagt
ttgccagcttctcataacgactcagaagagtctgattttacaacgtatacctccgagggc
gaaaccctacaaacccacttattatggcagcttaatgtagccccattaaccgatagagat
aaaacaattgccattaatattattgattgtattaatgaagatggttatttagaagagtca
atcactgatatttgtgaagggttggatgcatcgctagaggttgaggctgatgaagtcgaa
atgatgcttcattacattcagcagtttgatccagtggggataggcgcacgagatctaaaa
gaatgtttactcctacagttaaatggcttgtttactgagcacacttattatcaaggggca
aaagagcttgtgacaacttggttagatgttttagcgtcgaaagattataccaagttgatg
cggttgacgaaacttaaagaagaagagttaaggcaagtgataggtttagtacaatgcctt
aatcctaagcctggcagtcagatagagtctaaagagccagagtatattgtccctgatgtg
attgtccgtaaaaataatgaccactggattgttgagcttaatcaagaggcgatgcctaag
ctccgtgttaatgcacaatatgcaagttatgtacaacgtgctaacaattcatcagataat
caatttttaaaaaaccaacttcaagaagcacgttggtttatcaaaagcttacaaagtcgt
aatgaaacactgatgaaagttgcaacacaaattgttgaacatcagcgtggctttttagaa
tatggcgaagaagcgatgaagccattgattttatcagaagtggctgacgtagttgggatg
cacgagtcgactatttctcgtgtaacaactcaaaaatatatgtacaccccccgtggtatt
tatgagctgaaatattttttttcaagtcatgttaatacttccgaagggggggagtgttca
tcaacggctattcgcgctatgattaaaaaactaattgctgcagaggattctaaaaagcct
ttgagtgatagtaaattgacctctttattggaggagcaaggtgtacaagtggcgagaaga
acagttgctaaataccgagaggcattgggcattggttcttcgagtgaacgtaaacaattc
atataa

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