Entomomonas moraniae: DM558_00115
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Entry
DM558_00115 CDS
T06727
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
emo
Entomomonas moraniae
Pathway
emo02020
Two-component system
emo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
emo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM558_00115
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM558_00115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emo03021
]
DM558_00115
Transcription machinery [BR:
emo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM558_00115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AZS49276
UniProt:
A0A3Q9JJW9
LinkDB
All DBs
Position
24302..25807
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AA seq
501 aa
AA seq
DB search
MKPTLALKIGQQLSMTPQLQQAIRLLQLSTVDLQQEIQEILESNSMLEQQEPGEEFDDNN
LLAEENILVNPSSQEISFKDHNHDNENTISTDDRNQVSSTDVIPEELPVDTNWDDIYQSS
LPASHNDSEESDFTTYTSEGETLQTHLLWQLNVAPLTDRDKTIAINIIDCINEDGYLEES
ITDICEGLDASLEVEADEVEMMLHYIQQFDPVGIGARDLKECLLLQLNGLFTEHTYYQGA
KELVTTWLDVLASKDYTKLMRLTKLKEEELRQVIGLVQCLNPKPGSQIESKEPEYIVPDV
IVRKNNDHWIVELNQEAMPKLRVNAQYASYVQRANNSSDNQFLKNQLQEARWFIKSLQSR
NETLMKVATQIVEHQRGFLEYGEEAMKPLILSEVADVVGMHESTISRVTTQKYMYTPRGI
YELKYFFSSHVNTSEGGECSSTAIRAMIKKLIAAEDSKKPLSDSKLTSLLEEQGVQVARR
TVAKYREALGIGSSSERKQFI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaccttagcgttaaagataggacaacaactgtcaatgacaccccagttgcag
caagcaattaggcttttgcaattgtctactgttgatttacaacaagaaattcaagaaata
ctagaatctaactctatgttagagcagcaggaacccggtgaggagtttgatgataacaac
ttattggcagaagaaaatatactggttaatccgtcgagccaagaaattagtttcaaagat
cataatcatgacaatgaaaatacgataagcactgacgatagaaaccaagtttcatcaact
gatgttattcctgaagagctccccgttgatactaattgggatgatatttatcaaagtagt
ttgccagcttctcataacgactcagaagagtctgattttacaacgtatacctccgagggc
gaaaccctacaaacccacttattatggcagcttaatgtagccccattaaccgatagagat
aaaacaattgccattaatattattgattgtattaatgaagatggttatttagaagagtca
atcactgatatttgtgaagggttggatgcatcgctagaggttgaggctgatgaagtcgaa
atgatgcttcattacattcagcagtttgatccagtggggataggcgcacgagatctaaaa
gaatgtttactcctacagttaaatggcttgtttactgagcacacttattatcaaggggca
aaagagcttgtgacaacttggttagatgttttagcgtcgaaagattataccaagttgatg
cggttgacgaaacttaaagaagaagagttaaggcaagtgataggtttagtacaatgcctt
aatcctaagcctggcagtcagatagagtctaaagagccagagtatattgtccctgatgtg
attgtccgtaaaaataatgaccactggattgttgagcttaatcaagaggcgatgcctaag
ctccgtgttaatgcacaatatgcaagttatgtacaacgtgctaacaattcatcagataat
caatttttaaaaaaccaacttcaagaagcacgttggtttatcaaaagcttacaaagtcgt
aatgaaacactgatgaaagttgcaacacaaattgttgaacatcagcgtggctttttagaa
tatggcgaagaagcgatgaagccattgattttatcagaagtggctgacgtagttgggatg
cacgagtcgactatttctcgtgtaacaactcaaaaatatatgtacaccccccgtggtatt
tatgagctgaaatattttttttcaagtcatgttaatacttccgaagggggggagtgttca
tcaacggctattcgcgctatgattaaaaaactaattgctgcagaggattctaaaaagcct
ttgagtgatagtaaattgacctctttattggaggagcaaggtgtacaagtggcgagaaga
acagttgctaaataccgagaggcattgggcattggttcttcgagtgaacgtaaacaattc
atataa
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