Entomomonas moraniae: DM558_08655
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Entry
DM558_08655 CDS
T06727
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
emo
Entomomonas moraniae
Pathway
emo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM558_08655 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emo03019
]
DM558_08655 (recQ)
03400 DNA repair and recombination proteins [BR:
emo03400
]
DM558_08655 (recQ)
Enzymes [BR:
emo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM558_08655 (recQ)
Messenger RNA biogenesis [BR:
emo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM558_08655 (recQ)
DNA repair and recombination proteins [BR:
emo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM558_08655 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_7
HTH_23
HTH_29
HTH_40
IF2_N
HTH_11
ResIII
HTH_38
GerE
Sigma70_r4_2
HTH_28
HTH_20
HTH_22
Rhodanese
HTH_Tnp_ISL3
DNA_pol3_delta_C
HTH_17
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AZS50847
UniProt:
A0A3S9XEF8
LinkDB
All DBs
Position
complement(1796514..1798631)
Genome browser
AA seq
705 aa
AA seq
DB search
MYKRALSILKNTFGYDSFRGQQGVIVEHVAKGCDALVLMPTGGGKSICFQLPALLRDGVA
VVVSPLIALMQDQVDTLNELGVKAAALNSSLSAQEQRTIAKELLAGEIKFLYVAPERLVQ
ERMLNFLRQLPLALFAIDEAHCVSQWGHDFRPEYLQLGELAKLFPTIPLVALTATADTRT
QQEIIERLHLKQAKTFIDSFNRPNIFYQIQAKNQPKKQLLNFLSDKHDQAGIVYCMSRKR
VEETAEYLQDQGYLALPYHAGLSNSVRAANQNRFLKEEGIIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPAEAWMVYGLQDVLFNQQLVVQSEASEQHKRVELYK
LQTMLGLCEEIRCRRQALLAYFDETLAEPCGYCDNCRDNVETWDATEAAQKALSAVYRTG
QRYGVGHLVDVLLGHNTEKVTALGHQHLSVFGIGRLHSDKTWRTLFRQMIVRGLVEIDLD
GFSGLRLTPLARPVLRGEEHLQLRVDQSGQRSDKPRTVIHQIQEGEKELWEALRILRRQL
ADEHNVPPYVIFHDATLLEMVRMKPRTLGDMAMINGIGTHKLENYGKVFLDVINGQEVSD
SRAQDIQYEVVALARAGMSVQQIAQQLNCSRKVVYRTLATGIRQQQLSLEQAIDLPENLL
DKIQTSFLEDEGKLSSVPKVYKQLGGQVEEGILYCVQSALADMFQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacgagcattatccatccttaaaaatacctttggttacgactcatttcgtgga
caacagggtgttattgttgagcatgttgctaaaggatgtgatgctcttgttttaatgcct
acagggggcggtaaatcaatttgttttcagctgcctgcgttattaagggatggagtagct
gttgttgtctccccattgattgcgttaatgcaagatcaggttgatacgttaaatgagctt
ggtgtaaaggccgctgcgttgaactcatcgctttcagcccaagagcaacgaaccattgct
aaggagttgttagcgggagaaattaagtttttatatgtcgctcccgagcgtttagtacag
gaacggatgctaaattttttacgccagctacctttagccttatttgctattgatgaggca
cactgtgtttctcagtggggacatgattttagaccagaatatttacaacttggtgagttg
gctaagttgtttcctactatcccccttgttgcgttaactgctactgctgatacacgaaca
cagcaagagattattgagcgtttacacctaaaacaagccaaaacctttatagacagtttt
aaccgccctaatattttttatcagatacaggctaaaaatcagcctaaaaagcagctatta
aattttttaagtgataaacatgaccaagcggggatcgtgtattgcatgtctcgtaagcgt
gtcgaagagactgctgagtatctacaagatcaaggatatttagcattaccttatcatgca
gggctttcaaatagtgttcgggcagcaaatcagaaccgttttttgaaagaagagggcatt
atcatggtggcaactattgcctttggaatggggattgataagcctaatgtccgttttgtt
gcgcatttagatctacctaaaagtttagaagcatattatcaagagacggggcgggctggt
cgtgatggtttgcctgctgaagcatggatggtctatgggctacaggatgtgttgtttaat
cagcaactggttgtacagtctgaggccagtgaacaacataagcgagttgagctctataag
ttgcaaactatgttagggttgtgcgaagaaattcgttgtcgtcgccaagccttattagcc
tattttgatgaaacattggctgaaccctgtgggtattgtgataattgccgtgataatgtg
gaaacgtgggatgctactgaggcggctcaaaaagcgttgtctgctgtttatcgtacggga
cagcgttatggagtaggacatctggtggatgtgctattagggcataatacggagaaggtc
actgcattggggcatcagcatctttctgtttttggtattggccggctacactcagataaa
acctggcgcacactgtttcgtcaaatgattgttcgcggacttgttgaaatagatttagat
ggtttttcaggattacgtctaactcccttggcaaggcctgttttacgtggtgaagagcat
ctacagttacgtgtagatcagtcagggcaaaggtctgataagccaaggactgtgattcat
caaattcaagagggtgagaaagagctttgggaggcactccgcatcttacgccgtcaactc
gcagatgaacataatgtgccgccctatgttatatttcatgatgcaacgctattggaaatg
gtgcgcatgaagcctagaactttgggtgatatggccatgattaatggtataggaacgcat
aagttagaaaattatggtaaggtgttcttagatgtgattaatgggcaagaagttagtgat
tcaagagcacaggatattcaatatgaggtagttgcattagcgcgtgcagggatgagtgtt
caacagatagcacagcagctaaattgttcacgcaaagttgtttatcgtacattggcgaca
ggaatccgccagcaacaactctcgttagaacaagctatcgatctacccgaaaatttgttg
gataaaattcagactagctttttagaagatgaaggaaagttaagttctgtgccaaaagtt
tataaacaactaggcgggcaagttgaagagggaattttgtattgtgttcaatcggcattg
gctgatatgtttcagtag
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