Entomomonas moraniae: DM558_09500
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Entry
DM558_09500 CDS
T06727
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
emo
Entomomonas moraniae
Pathway
emo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM558_09500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emo03019
]
DM558_09500
03009 Ribosome biogenesis [BR:
emo03009
]
DM558_09500
Enzymes [BR:
emo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DM558_09500
Messenger RNA biogenesis [BR:
emo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM558_09500
Ribosome biogenesis [BR:
emo03009
]
Prokaryotic type
rRNA processing factors
DM558_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AZS52223
UniProt:
A0A3Q9JN25
LinkDB
All DBs
Position
complement(1980055..1982631)
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AA seq
858 aa
AA seq
DB search
MLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGRIAAIQPSLEAAFVDFGSG
RQGFLPLKEISREYFVNGQENHSGRHSIKDLIQEGQEVIVQVEKEERGNKGAALTTFISL
AGRYLVLMPNNPSAGGISRRIEGDERVELKEILSALKAPADMGLIVRTAGLGRGIEELQW
DLDYLLQLWSAIKEAADSGPAPFLIYQESNVIIRTIRDYLRQDIGEVLIDTVDAYEEALN
FISQVIPQYKHKVKLYQDAVPLFNRYQIESQIETAFQREVRLPSGGSIVIDPTEALVSID
INSARSTRGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPSKNRRAVEDCV
MEALKADRARIQVGSISKFGLLEMSRQRLRPSLRETSGVTCPRCNGQGTIRDVESIALAI
LRLIEEETLKESTAEVRAQVPIPVSAFLLNEKRNAITKIELRSQVRIVIIPNDHLETPNF
EVQRLRTDSPDAQFNELSYEIQHAEVEEDTNHSNSSKALIRQEAKVKTIAPKQPAPEVDK
KIGGLRGLVKSLVSLFSVKEESEEAAKTERSTENIARNNNRRNNEQRNQPRRNNNRRDNQ
QNSREKDEERKTQARPDRRRNTEEKVKDKVTDSDIVETQDDLVKGIENNVGENDERPRRR
TRGQRRRNTRNDRPREPRNNNEVTDSAEVGQQDLLETANQTPAKANEPEAIKKERVDIDR
DFSESKDKVVESVSTSKELVVNKSVEESHVSFQLEKVAEVVFEPKPDVDIVEKPEASKKT
SQEVNRANNIVNDVVEEKETIEPPARTIGRAPNDPREMRRRQKTEEESNAPVQVVSEPKK
ELSSQLPLESASKTEHDN
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgctaataaatgcaactcagcctgaagagttgcgtgtagcgcttgttgatgggcaacgt
ttatttgatttagatattgagtctggtgcccgtgagcaaaagaaagcgaatatctataaa
ggccgtatcgccgcaattcaacccagtttagaagccgcttttgttgactttggttcgggt
cgacaaggttttttaccgcttaaagaaatttcacgagaatattttgtcaatggacaagag
aaccatagtggtcgccatagtattaaagatttaatacaagaaggccaagaagttattgtt
caagtagaaaaagaagagcgtggtaataaaggcgcagctttaaccacatttattagcctt
gcggggcgttatttggtgttaatgcctaataatcctagtgcgggcggtatttcacgccgt
attgaaggcgatgaacgcgttgagttaaaagaaatattaagcgcattgaaagctcccgct
gatatggggttaatagtaagaactgcaggtcttggccgtggtattgaagagttgcagtgg
gatttagattatttattgcaattatggtcagcgattaaagaagcggctgatagtggtccc
gcgcctttcttgatttatcaagaaagtaatgtgattattcgtacaatccgcgactattta
cgccaagatattggtgaagtattaattgatacagtggatgcttatgaagaagctttaaac
ttcattagccaagtcatcccgcaatacaaacataaagttaaactgtatcaagatgcagtt
cctttatttaatcgctatcaaatagaaagccaaattgagacagcattccaacgtgaggta
cgtctaccttcaggcggttctattgttatagacccaacagaggcattggtttctattgat
attaactcagctcgttcaacccgaggcagtgatattgaagaaacagctttgcaaacgaac
ttagaagcggctgaagaaattgcacgccaactccgtttgcgtgatatcggtggtcttatt
gttattgattttatcgacatgactccttctaaaaatcgtcgtgcggtagaagactgtgtg
atggaagctttaaaagcagacagagcgcgtatacaagtgggttctatttctaaatttggt
ctattagaaatgtcacgtcaacgtttgagaccttctctacgtgaaaccagtggtgttact
tgtcctcgctgtaatggtcaaggaaccattcgtgatgttgagtcgattgcattggctatt
ttacgtttaattgaggaagaaacactaaaagaatctacagctgaagtaagagcacaagtg
ccaattcctgtatcagctttcttgctcaatgaaaaaagaaacgcaattaccaaaatagaa
ctaagaagccaagtgcgtattgtgattattccaaatgatcacttagaaacaccaaatttt
gaagttcaacgattacgtacagatagcccagatgcacaatttaacgaattaagttatgaa
attcagcacgcagaagtagaggaagatactaatcattctaactcttctaaggcgcttatt
cgtcaggaagcaaaggttaagacgattgctcctaagcaaccagctccagaggtagataaa
aaaataggtggtttaagaggactcgtaaaatcactcgttagcttattttctgttaaagaa
gagtcagaagaggctgctaaaacagaaagatctactgagaatatagcgcgtaataataat
cgccgtaataacgagcaacgtaatcagcccagacgtaataataaccgtagagacaatcag
caaaatagtagagagaaggatgaggagcgtaaaacacaagctcgtcctgatcgccgtcgt
aatactgaagaaaaggttaaagataaagttactgacagtgacattgttgagacacaagat
gacctagttaaaggtattgagaacaatgtcggtgagaatgatgagcgtccacgtcgtcgt
actcgagggcaacgtcgtcgtaatacaaggaatgaccgtccacgtgaaccacgtaataat
aatgaagttactgactctgcagaggtaggacaacaagatttgttggaaacagctaaccaa
acacctgctaaagcgaatgagccagaagctattaaaaaagaacgagttgatattgataga
gatttttctgagtcaaaggataaagtagttgagtccgttagtacatcgaaagaacttgta
gtaaataaatcagtagaagagtctcatgtatcttttcaattagaaaaagttgctgaggtt
gtttttgaaccaaagcctgatgtagatatagtagagaagccagaggctagcaaaaaaact
tctcaagaggttaatagagctaataatatcgtaaatgatgttgttgaagagaaagaaact
atagagccacctgctcgtactattggacgtgcacctaacgatcctagagaaatgcgccgt
cgccagaagaccgaagaagaaagcaatgctcctgtacaagtggtgagtgaacctaaaaaa
gaattaagttcacagttaccgttagaatcagcctctaaaacagaacatgataattaa
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