Enterobacter mori: L6Y89_01085
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Entry
L6Y89_01085 CDS
T08239
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
emor
Enterobacter mori
Pathway
emor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L6Y89_01085 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emor03021
]
L6Y89_01085 (rpoB)
03400 DNA repair and recombination proteins [BR:
emor03400
]
L6Y89_01085 (rpoB)
Enzymes [BR:
emor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L6Y89_01085 (rpoB)
Transcription machinery [BR:
emor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L6Y89_01085 (rpoB)
DNA repair and recombination proteins [BR:
emor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L6Y89_01085 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
UKJ21633
LinkDB
All DBs
Position
215274..219302
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALQYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKLIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGAYISETIRVDPTTDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQEEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDDEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggtctggaagcagccttccgctccgtgttcccgattcag
agctacagcggtaactccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaacggtactttcgtaatcaacggt
actgagcgtgttatcgtttcccagctgcatcgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacacactcttccggtaaagtactgtataacgcacgtatcattccttaccgt
ggttcatggctggacttcgagttcgatccgaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagctgcctgcaaccatcattctgcgtgcgctgcaatacaccactgaacagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagctgcagatggag
ctggtgccggaacgtctgcgtggtgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccatatccgccagctggaaaaagat
gatatcaaactcatcgaagttccggttgagtacattgcaggaaaagtagccgcgaaagat
tacgttgacgagtcaacgggcgagctgatctgcccagcgaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggcgcgtatatttctgagactatccgtgtcgacccaaccaccgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gcggaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgtgatgagatcgaaggttccggtatcctg
agcaaagacgacatcattgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccagttccgcgttggcctggtgcgtgttgagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgca
gcagtgaaagagttcttcggttcaagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctctgcactcggcccgggcggtctgacccgt
gagcgcgcaggctttgaagttcgagacgtacacccgacccactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggtttcctcgagaccccgtatcgtaaagtgaccgacggtgttgttacc
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcagttgctaagcgt
ggcggtaccgttcagtacgtcgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggtatcgacatttataacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcatgtgtgtcc
cgtgacaccaagctggggccagaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctctaaactggatgaatccggtatcgtttacatcggtgctgaagtgaccggcggc
gacattctggttggtaaggttacgcctaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgcaatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgatgttcaggtcttcacccgtgacggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcagatcctcgaagcgggtctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgatgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggccgttaaacgtcagatc
cagcctggtgacaagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaaccca
ctgggtgtaccgtctcgtatgaacatcggtcagatcctggaaacccacctgggtatggct
gcgaaaggtatcggcgacaagattaacgccatgctgaagcagcaggaagaagtcgcaaaa
ctgcgcgaattcatccagcgtgcctacgatctgggtaccgacgtgcgtcagaaagtcgac
ctgaacaccttcagcgatgatgaagttctgcgtctggcggaaaacctgcgtaagggtatg
ccaattgcaacgccggtattcgacggtgcaaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcagcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataagaacatcgtggacggcaaccatcagatggagccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
