Enterobacter mori: L6Y89_16315
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Entry
L6Y89_16315 CDS
T08239
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
emor
Enterobacter mori
Brite
KEGG Orthology (KO) [BR:
emor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emor03009
]
L6Y89_16315 (srmB)
Enzymes [BR:
emor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L6Y89_16315 (srmB)
Ribosome biogenesis [BR:
emor03009
]
Prokaryotic type
rRNA helicases
L6Y89_16315 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
AAA_30
AAA_11
LuxC
CMS1
Motif
Other DBs
NCBI-ProteinID:
UKJ20322
LinkDB
All DBs
Position
3470331..3471659
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLNALESKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RNQTMLFSATLEGEAIKDFAERLLEDPAEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQEDALRTIVFVRKRERVHELAEMLRNAGINNCYLEGEMAQIKRTEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDYLLL
QKIGRYVDEPLKARVIDELRPTTRAPSEKMTGKPSKKALAKRAERKEKEKEKPRVKQRHR
DTKNIGKRRKPSAAAPETKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctcaatgcacttgag
agcaaaggctttacacgcccgaccgccattcaggccgcggccattccgcctgcgcttgag
ggccgcgatgtgctcggttctgcgccaaccggcacggggaaaacagcagcctacttgctg
cctgtcttgcagcacctgctcgatttcccacgtaaaaaatcaggcccaccgcgtatttta
attctgacgcctacgcgcgaactggcaatgcaggttgccgatcacgcgcgtgaactcgcg
gcaaatactcatcttgatatcgccaccatcaccggcggtgttgcgtacatgaaccacgcc
gaagtgttcagcgaaaaccaggacatcgtcgttgcgacgaccggccgcctgctgcagtac
atcaaagaagagaactttgactgccgcgcggttgaaacgctgatcctggatgaagccgac
cgcatgctggacatgggcttcgcgcaggatattgaacacattgcgggtgaaacgcgctgg
cgtaaccagacaatgctgttctctgccacgctcgaaggggaagcgatcaaagacttcgca
gagcgtctgctggaagatccggcggaagtctcggcgacgccatccacccgtgagcgtaag
aagatccaccagtggtactaccgcgcggataaccttgagcacaaggtcgaattgctgaaa
cacctgctgaagcaggaagatgctctgcgcacaatcgtgtttgtgcgcaagcgcgagcgc
gtgcacgagctggcggaaatgctgcgtaacgccgggatcaacaactgctatctcgaaggc
gagatggcgcagatcaagcgaactgaaggcattaagcgtctgaccgacggtcgcgtgaac
gttctggttgcgactgacgttgccgcacgcgggatcgacatccctgacgtgagccacgtc
attaacttcgatatgccgcgcagcggagatacctatctgcaccgtattggccgtaccggc
cgcgcgggccgcaaagggattgcgatttcactggttgaagcacatgactacctgctgctg
cagaagattggccgctatgttgatgagccgctgaaagcgcgcgtcattgatgagcttcgc
ccgaccacccgtgcaccgagcgaaaaaatgacgggcaagccgtccaaaaaagcgctcgcg
aaacgtgctgagagaaaagagaaagaaaaagagaagccgcgcgttaagcaacgccaccgc
gacaccaaaaatattggtaaacgtcgcaagccaagcgctgccgcgccagaaacgaaaact
gaagagtaa
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