Enterobacter mori: L6Y89_19890
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Entry
L6Y89_19890 CDS
T08239
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
emor
Enterobacter mori
Brite
KEGG Orthology (KO) [BR:
emor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emor03019
]
L6Y89_19890 (csrD)
Messenger RNA biogenesis [BR:
emor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L6Y89_19890 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
UKJ20976
LinkDB
All DBs
Position
complement(4214005..4215945)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAIQDKLVNRVESVASVIDTRLITTSFPA
LSPELDELMVPVDIVRVDIVQGKQTVFSHTRRGSYRPAGTVSQYRVVTVDSLKHPGMTIR
MVYQDPMANYFHSLMTTAPLTIAVAFIVLLIFLAVRWLRRQLAGQELLETRSVRILNGER
GPQVRGSVYEWPTRTSSALDVLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDSEKVGTHGVVMMVRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEAESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
LKNGNVHHRELMCRIFDGSEEVISAEYLPMVLQFGLSEEYDRQQITRVIPFLSFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALG
ARVAVTQAGLTLVSTRWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTQTQV
FAAGVRSRSEWQMLTERGVTGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcggcttttatcaccctgctaacggggttaacgattttt
gtcaccctgattggctgctccttaagtttttataatgccatccaggacaagctggttaat
cgggtagagtcggttgcatcggttattgatacgcgtttgattacaacttcattcccggca
ctgtcgccagagctggatgagctgatggtgcctgttgatattgttcgggtcgatatcgtc
cagggaaagcagaccgttttcagtcacacccggcgggggagctaccgtccagcgggtacg
gtcagtcagtatcgggtcgtcacggtcgattcgcttaaacatccgggtatgaccattcgc
atggtctatcaggatccgatggccaactattttcactcgttgatgaccaccgcgcctctc
accattgctgttgcttttatcgtgctgcttatttttctggcggttcgttggttgcgccgt
cagcttgccggacaagaattgcttgaaacacgctcagtaaggatcctgaacggtgagcgt
ggcccgcaggtgcggggttcggtctatgaatggccgacgcgcaccagtagcgcactggat
gtgttgctctcagaaatccagttcgccagcgaccagcgtagccgcatggacacgctaatc
cgctcttacgcggcacaggataataaaaccggtctgaataaccgtctcttttttgataat
cagctggcaacgttgttggatgactccgaaaaggtgggtacccacggcgtagtcatgatg
gtccgcttgcctgatttcgatctgctgcgcgacacctggggacagcgtgtggcggaagag
aacctctttacgctgatcaatctcctgtctacttttatcatgcgctacccgggggcgctg
ctggcacgttatcaccggagcgactttgccgtgttattgccgcaccgcacgttgaaagag
gcggaaagtatcgccagccagctactgaaagccgtcgatgcgctgccgcaaagcaaaatg
ctcgacagagacgatatggtccatatggggatctgtgcctggcgcggtgggcaatcgact
gagcaggtgatggagcatgcggaagccgctacccgcaacgccgttttgcagggcgcaaac
ggatgggcggtttacgacgattcgctgccggaaaaaggacgcgggaacgtgcgctggcgt
actttgattgagcaaatgctcagtcgtggcgggccacggatctatcaaaaaccggcggtc
ctgaaaaatggaaatgtgcaccaccgcgagttgatgtgccgtatttttgatggctcggaa
gaggttatttctgctgaatacctgccgatggtactgcaatttggattatccgaagagtat
gaccgccagcagataacccgggtgattccgtttttatcgttttggccggaagaaaacctg
gcattacaggttaccgtagagtcgttaatacgcccgcgttttcaacgctggctgcgcgat
actttaatgcaatgcgaaaaatcgcaacgcaaacgcattatttttgaacttgctgaggcg
gatgtaggtcaacacatcagccggttgcgtccggtggtgcgtttgatcaatgcgttgggt
gcgcgagtagcggtcacgcaggccggtttaacgctggtcagcacccgttggatcaaggag
ctggatgttgagttattaaagttacatccaggtctggtaaggaatatcgaaaagcgcacg
gaaaaccagctgctggtacagagcctggtggaagcatgcaaaggaacgcaaacacaagta
tttgccgcaggcgtgcgttcgcgaagtgaatggcagatgttgacagagcgcggtgtaaca
ggaggtcagggggatttttttgccgcctctcagccgcttgacaccaatgtgaaaaaatat
ttgcaaagatactctgtttga
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