Endozoicomonas montiporae: EZMO1_0624
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Entry
EZMO1_0624 CDS
T09822
Symbol
dbpA
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
emp
Endozoicomonas montiporae
Brite
KEGG Orthology (KO) [BR:
emp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emp03009
]
EZMO1_0624 (dbpA)
Enzymes [BR:
emp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EZMO1_0624 (dbpA)
Ribosome biogenesis [BR:
emp03009
]
Prokaryotic type
rRNA helicases
EZMO1_0624 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
ERCC3_RAD25_C
Med20
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMO54864
UniProt:
A0A142B7Y8
LinkDB
All DBs
Position
complement(717708..719087)
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AA seq
459 aa
AA seq
DB search
MSQALFSSLPLPPALLDNLKTIGYREMTTIQQQSLPLALDGKDLIAKAKTGSGKTAAFSI
PMLTKIRQRYFGCQALVLCPTRELATQVANEIRKLARYQQNIKVVTLCGGQPIGPQIGSL
AHGAHIIVGTPGRIQDHLRKRTLSLEKVSTLVLDEADRMLDMGFIDAIENIIDHTPNYRQ
TLLFSATYPKGIRQLSDRFQHEPEEVTVESVHSHQHIAQAFYQAEHHEKPAVLHKLLAHH
QPASCVIFCNTKQTCKDVGVELYNLGYKPLVLHGDMDQKERDQMLVRFSNQSSNILIATD
VAARGLDIDDLACVINYDLSRDPEVHVHRIGRTGRAGKDGLAFSLFTSKERYKLERIEDI
LKAELVQSDAGQLPSPKADAPKAPMATLAIDGGRKNKVRPGDILGALTGDAGIAGDQVGK
INIFDFVAYVAVKRESARQALSRLEKGKIKGRKFKVRRI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaagccctgttttccagcctgccgctgccacccgccttgttagacaacctgaaa
accattggttatcgcgagatgacgactatccagcaacagagcctgcctctggcactggac
ggcaaagacctgattgccaaagccaaaaccggtagcggcaaaacagcggcgttcagtatt
ccgatgctgacgaaaatccgtcaacgttatttcggctgtcaggctctggtgctgtgtccg
acccgggaactggcgactcaggtggccaatgaaattcgcaaactggctcgttatcaacag
aacataaaagtagtgacattgtgtggcgggcaacccatcgggccgcagattggttcactg
gcgcatggtgctcacattattgttggtacaccgggccgcattcaggatcatttacgcaaa
cgtactctctcccttgaaaaggtgagcacgctggttctcgacgaagcagaccgtatgctg
gatatgggctttattgatgccattgagaacatcatcgaccatacaccgaactatcgtcag
accctgctcttttctgccacctatccaaaaggcattcgccagctcagtgaccgcttccag
catgaaccggaagaagtcaccgtcgagtccgtccacagtcatcagcatattgcgcaggct
ttttatcaggctgaacaccatgaaaaaccggccgtattacacaaactgctggcacaccac
cagcctgcttcctgtgtcattttctgcaacaccaaacagacctgtaaggacgtaggtgta
gaactttacaatctcggttacaaacctctggtgctccatggcgatatggatcagaaagaa
cgtgaccagatgctggtgcgtttttccaaccagagttccaacattctgattgctaccgac
gttgcggcccgtggtctggatattgacgatctggcttgtgtcatcaactacgacctcagc
cgtgatccggaagtgcatgttcaccgtattggtcgaaccggccgtgccggtaaagatggt
ctggctttcagtctctttacttctaaagaacgctataagctggaacggattgaagacatt
ctgaaagcagaactggttcaatccgatgccgggcaactcccttcacccaaagccgatgcc
cctaaagccccgatggcaacactggccattgatggtggtcgcaaaaacaaagtcagaccc
ggcgatattcttggtgcattaacaggcgatgccggtattgccggagatcaggtcggcaaa
atcaatatctttgattttgtggcgtacgttgctgtcaaaagggagtcggctcgacaggct
ttgagccgactggagaaaggcaagatcaaaggcagaaagtttaaagttcgccggatttaa
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