Endozoicomonas montiporae: EZMO1_1227
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Entry
EZMO1_1227 CDS
T09822
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
emp
Endozoicomonas montiporae
Brite
KEGG Orthology (KO) [BR:
emp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emp03009
]
EZMO1_1227
Enzymes [BR:
emp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EZMO1_1227
Ribosome biogenesis [BR:
emp03009
]
Prokaryotic type
rRNA helicases
EZMO1_1227
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
SNF2-rel_dom
P-loop_SecA
NACHT
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMO55420
UniProt:
A0A142B9J4
LinkDB
All DBs
Position
complement(1434236..1435567)
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AA seq
443 aa
AA seq
DB search
MIFSELALHDRLQKALDQLQFTQATPVQEATIPEVLNGKDLIVNAETGSGKTAAFLLPML
HQMQNNPAPRSSTRGLILVPTRELARQVLTECEKLAAFTWLKAGIITGGDDFRHQVNTLR
KNPEILIATPGRLLEHMENSNTDFSDLEYLVLDEADRMLDFGFSADMLKIAGECRTERQT
LLFSATMKQKGMGELVQFVLKNPETITLSTARDKHENIHQQIMLSDDNPHKERLLSWLLK
HETFDKALVFSNTRTNAEHLFNLLERQGLQVGVLHGDMDHKHRKQIMNRYQDGQINILVA
TDVAARGLDIKGVQLVINFDMARSGDDYVHRIGRTGRAGEKGLAISLIGPNEWNLMSSIE
RYLKTRFEKRSIKELRGSWKGPKKVKASGKAAGSKKKKVSKKENDKTKARHRVKKNVGKR
RKPTEAGSTAVDAGFEPLRRKKN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgattttctccgaactggcactgcacgaccgcctgcaaaaggctctggatcaactgcaa
ttcacccaggcaacgcccgttcaggaagcgacgattcctgaggtgctcaatggcaaggat
cttatcgttaatgcagaaaccggcagtggtaaaaccgccgcgttcctgctgccgatgctg
caccagatgcagaacaacccggcaccccgttccagcacccgcggactgattctggtaccc
acccgggaactggcgcgtcaggttttgactgagtgtgaaaagctggcagcctttacctgg
ctcaaggcgggcatcatcaccggtggcgacgatttccgtcatcaggtcaacaccctgcgc
aagaatccggaaatcctgattgccacgccgggtcgcctgctggaacacatggaaaacagc
aataccgacttcagcgatctggaatatctggtactggatgaagccgaccggatgctcgac
ttcggcttcagtgccgacatgctgaagattgcaggcgaatgtcgtacagaacgccagacc
ctgttgttctcagccaccatgaaacaaaaaggcatgggcgaactggttcagtttgttctg
aagaaccctgaaaccattactctcagcaccgctcgcgacaagcatgaaaacattcaccag
cagatcatgctgtcggacgacaatccgcacaaagagcgcctgctgagttggctgctgaaa
cacgaaacctttgacaaagccttagtgttttccaacacccgaaccaatgccgagcacctg
ttcaacctgttggagagacagggtttgcaggtcggtgtattgcacggcgatatggatcat
aaacaccgcaaacagattatgaaccgctatcaggacggacaaatcaacattctggtcgct
actgatgtagcagcccggggtctggacatcaaaggcgtgcagctggtcattaacttcgat
atggcacgcagtggcgacgattatgtgcaccgcattggtcgtaccggccgtgccggtgaa
aaagggctggcgatttccctcattggtcctaatgaatggaacctgatgtccagcattgag
cgttacctgaaaacccgtttcgaaaaacgctccatcaaggaattgcgcggttcctggaaa
ggcccgaaaaaggttaaagcttccggcaaagcagcaggctcgaagaaaaagaaagtcagc
aaaaaagagaacgataaaaccaaagcccgtcatcgcgtaaagaaaaacgtcggcaaacga
cgcaagcctacagaagcgggcagtacagccgttgatgcaggttttgaaccattgcgtcgt
aagaaaaactga
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