Endozoicomonas montiporae: EZMO1_3395
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Entry
EZMO1_3395 CDS
T09822
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
emp
Endozoicomonas montiporae
Pathway
emp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EZMO1_3395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emp03400
]
EZMO1_3395
Enzymes [BR:
emp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EZMO1_3395
DNA repair and recombination proteins [BR:
emp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EZMO1_3395
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EZMO1_3395
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EZMO1_3395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMO57386
UniProt:
A0A142BF60
LinkDB
All DBs
Position
complement(3743960..3745393)
Genome browser
AA seq
477 aa
AA seq
DB search
MLKSFLWFDFETFGTNPATDWPSQFAAIRTDADLNEIGEPVNLFCKFPEDHLPHPMATLV
TGLTPQAVNARGMAEPEFIQRILDELMVPGTCAVGYNTIRFDDEVIRNSLYRNFHDPYLR
ERANGNSRWDLIDLVRMTGALRPEGIQWPKREDGFNSYKLEELTKANGIEHGDAHDALSD
VRATIAMARLIRDKQPKLFQFYLDHRFKDKAGALLDLHTKAPLVHVSGMFGAAKHCLAVV
MPLAGHPVNRNQVFVYDLSVDPTPLLAMSVEEIQENLFTPRQEGDTRERIPLKGVSLNKC
PALAPLKVLQAADQTRLGIDLDACFRHREILLSHPELVEKIQAVFSGSPRKETEDPDQML
YSGGFFSWADKDKMERIREASPESLGHLQLAFEDGRLDEMLFRYRGRHYPETLTQEELSQ
WHAFRRQRLSDEDQAVLGFGRFWSDLDIARQEASVSDRELLDQLAAYADQLQAGLTH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagttttttatggttcgatttcgaaacctttggcactaaccccgctactgac
tggccatcgcagtttgctgccatcagaaccgatgctgacctgaatgaaatcggtgagccg
gtcaacctgttctgcaagtttcctgaagatcacttacctcacccgatggcaacccttgtg
acgggcttaacccctcaggcggtgaatgccagaggaatggcagaaccggaatttattcag
cgtattctggacgagcttatggtgcccggtacctgtgctgtcggttacaacaccattcgt
tttgacgatgaggtgatcagaaacagcctttaccggaactttcatgacccttatcttcgg
gagcgagccaatggcaatagccgctgggatctgattgatctggtgcgcatgaccggagct
ttgcgaccagagggtatacagtggccaaagcgtgaagatggttttaacagttataagctg
gaagagctgacgaaagccaacggtattgagcatggtgatgcgcacgatgcactgtctgat
gtgcgggctaccattgccatggcgcgcctgattcgggataagcagccaaaactgtttcag
ttttatctggatcaccgctttaaagacaaagccggagccttgctggatctacacaccaaa
gcgccactggttcatgtgtcgggcatgtttggggcggctaagcactgtctggctgttgtc
atgccattggccgggcatccggttaatcgcaatcaggtgtttgtctatgacctgagtgtt
gatccaacgccattgttggcaatgtcggtggaagagattcaggagaacctttttaccccg
agacaggaaggtgatacaagggagcgcattcctttgaagggtgtcagcctgaataagtgt
ccggcactggcgccattgaaagtgcttcaggctgctgatcagacgcggttgggcatcgat
cttgatgcctgtttccggcatagagagatactgttgagtcaccctgagctggtagaaaag
attcaggctgtcttttccggttcaccgcggaaagagacggaagatcctgaccagatgctg
tattccggcggttttttctcctgggcggataaagacaagatggaacgtattcgtgaggcc
tcacctgaatcccttgggcacttacagttagcgtttgaagacggtcgtcttgatgaaatg
ctgttccgctatcgtggtcgccactatcctgaaacactgacacaggaagagctgtctcag
tggcatgccttcaggcgtcagaggttgtctgatgaggatcaggcggttctggggtttggt
cgtttctggagtgatctggacattgccagacaagaggcttcggtgtctgatcgtgagttg
cttgaccagttggccgcctacgctgaccaactgcaagctggtttaactcattaa
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