Endozoicomonas montiporae: EZMO1_3595
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Entry
EZMO1_3595 CDS
T09822
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
emp
Endozoicomonas montiporae
Brite
KEGG Orthology (KO) [BR:
emp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emp03016
]
EZMO1_3595 (rnd)
Enzymes [BR:
emp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EZMO1_3595 (rnd)
Transfer RNA biogenesis [BR:
emp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EZMO1_3595 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AMO57575
UniProt:
A0A142BFP9
LinkDB
All DBs
Position
3990764..3991900
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AA seq
378 aa
AA seq
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MPVPHPDPIWVTDNDTLATYCTQWLKLDAIALDTEFIRTDTFYPKPGLIQLGTGQEVFLL
DPVTIDNWQPFAQLLNSEEVVKVLHACSEDIEVFHLLTGKKPAAMFDTQLAASYAGLGHS
LGYQNLLKTLLDIDLPKDATRSDWLQRPLTDVQVSYATLDVVHLLEVYQLLKERLQPLPQ
WHWLLEDCANLSKGDLYPDPEEQWKEVKRAWQLRPKQLCVLKALAEYREREARRSNVPRN
RVIPKGSLWPLARYMPDNARSLSAIQDMRHTVIRHYGEEILSLIKMASELPREQYPEPLP
APLPKSAKEHGKQVKQYTSEKAQELNISVELLMLNKLLSSLLRSRLEHGQFIVPEQARGW
RREVFVEPMIEQLNQPEQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcccacatcctgatcccatctgggttacagacaacgacactcttgccacgtac
tgcacccaatggctgaaactggatgccatcgcgctggataccgaattcattcgcaccgat
actttttacccgaaacccggtctgattcaactgggcacaggtcaggaagtctttctgctc
gaccctgtcaccatcgacaactggcaaccttttgcacaactgttgaacagtgaagaagtc
gttaaagtgttgcacgcctgtagtgaagacatcgaagtgtttcaccttctgaccggtaag
aaacccgctgctatgttcgacacacagctggcggcgtcttatgccggtctggggcattca
ctgggttatcagaatctgctgaaaacactgctggatattgacctgcccaaagatgccacc
cgttctgactggttgcagcgccccctgaccgatgttcaggtcagttatgccacgcttgat
gtggtgcatctgcttgaggtttaccagctgctcaaagaacgcttacagccattaccccaa
tggcactggttgctggaagattgtgcaaacctgtccaaaggcgatctctaccccgatccg
gaagaacagtggaaagaggtcaaacgtgcctggcagcttcgtccgaaacagttgtgcgta
ctcaaggctctggcagaataccgtgaacgtgaagcacgccgcagcaatgtacccagaaac
agagtcattcccaaaggttctctgtggccactggcgcgctatatgccggacaatgcccgt
tcactgtcggctattcaggatatgcgacatactgttatacgccattacggggaagaaatt
ctcagcctgatcaaaatggccagtgaattgcccagagagcaataccctgaacccctgcct
gctcctctgccaaaatccgccaaagaacatggcaaacaggtgaaacagtacaccagtgaa
aaagcacaggaactcaatatttctgtagagctgctaatgctgaacaaactgctttcttcc
ctgctccgaagccggctggaacacggtcagtttatcgtgccggagcaagccagaggctgg
cgtcgtgaagtgtttgtagaacccatgattgaacaactcaaccaacccgaacaataa
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