Endozoicomonas montiporae: EZMO1_4120
Help
Entry
EZMO1_4120 CDS
T09822
Symbol
rp54
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
emp
Endozoicomonas montiporae
Pathway
emp02020
Two-component system
emp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
emp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EZMO1_4120 (rp54)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EZMO1_4120 (rp54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emp03021
]
EZMO1_4120 (rp54)
Transcription machinery [BR:
emp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EZMO1_4120 (rp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
RRP4_S1
DUF2205
Relaxase_C
Motif
Other DBs
NCBI-ProteinID:
AMO58048
UniProt:
A0A142BH22
LinkDB
All DBs
Position
4570568..4572049
Genome browser
AA seq
493 aa
AA seq
DB search
MKPSLQLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEVLESNPMLESEEAILDQERRD
QEASNANEGEQLVDLNAQEPPSPSESQEPEWSESIPNDLPVDSGWEEVYSSMPASSDDEF
DPLTRSRTTESLQEYLQWQLNLTPTTDTDRLLGETLIEAINPDGYLTNSLEDIFQSLTLN
PALAELDFDELKVMQRRIQQFDPVGCGSENLKECLSVQLAQLPSQTPFIHEAQKLIDHYL
EALGSRDYSQIMRRTRMKEHQLKEALSLIQSLNPKPGSEVDQSEPEYITPDISVRKVKER
WVVELNSESLPRLRINNSYASLVQRANSSRDNQFMKNQLQEARWFLKNLQSRNDTLLKVA
TKIVNFQQDFLEQGDEAMKPLVLADIAEAVEMHESTISRVTTQKYMHTPRGVYELKYFFS
SHVSTDSGGECSSTAIRALIKKLVQDENPGKPLSDNKIAGLLGEQGIKVARRTIAKYRES
MHIPPSNERKCLV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctctctacagcttaaaatgggtcagcagttgacgatgacaccgcaactgcag
caagccattcgcctgttacagctttcaactctggatctgcaacaggaaatccaggaagta
ctggaatccaacccgatgctggaaagcgaagaggccattctggatcaggaacgccgtgac
caggaagccagcaacgccaacgaaggtgaacagctggttgaccttaacgcccaggagcca
ccatccccttccgagtctcaggagccggaatggtccgaaagcattccgaacgatttgccc
gtagattccggttgggaagaagtctactccagcatgccggccagcagtgatgatgaattt
gacccgctgacccgctcgcgcaccaccgaatctctgcaggaatacctgcaatggcagcta
aacctgacacccaccactgataccgaccgcctgctgggagaaacactgatcgaagcgatc
aaccccgatggctatctcacaaactcgctggaagatattttccagagcctgactttaaat
ccggcattagctgagcttgattttgatgaactcaaagtcatgcagcgacgcattcagcaa
tttgatcccgttggttgcggtagtgaaaacctgaaagagtgtctgtccgttcaactggca
caactgccttcccaaacaccctttattcacgaagcccaaaagcttattgaccactatctg
gaagcccttggcagtcgggattacagccagataatgcgtcgcacgcggatgaaggagcac
cagctcaaggaagccctcagcctgattcagagcctcaaccccaagccgggctccgaagta
gaccagagcgaaccggaatacatcactccggatatttccgttcgcaaagtcaaagagcgc
tgggtcgttgagctgaattcagagtcactgccacgtctgcgcatcaacaacagttatgcg
tcactggttcagcgggccaacagcagccgggacaaccagttcatgaagaaccagctgcag
gaagcgcgctggtttctgaaaaacctgcaaagccgcaacgacacgctgctcaaagtagcg
accaaaatcgtcaattttcagcaagactttctggaacagggcgacgaggccatgaaacct
ctggttctggccgatattgcggaagcagtggagatgcatgaatccaccatatccagggta
acaacccagaagtacatgcatacccctcgcggtgtttatgaactgaagtatttcttctcc
agccatgtcagcaccgacagcggcggagagtgttcctcaacagccatcagggcactgatc
aaaaaactggttcaggatgaaaatccggggaagccgctcagcgataacaaaattgccggt
cttctcggggaacagggcataaaggttgcacgacgaaccattgccaagtatcgggaatcc
atgcacatcccgccttcaaatgaacgcaagtgcctagtgtaa
DBGET
integrated database retrieval system
