Emydura macquarii macquarii (eastern short-necked turtle): 137141020
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Entry
137141020 CDS
T11697
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137141020 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emq04040
]
137141020 (SCN8A)
Ion channels [BR:
emq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137141020 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
FraC
Motif
Other DBs
NCBI-GeneID:
137141020
NCBI-ProteinID:
XP_067385915
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
MAAQLLAPPGPDSFKPFTPESLANIEKRIAEEKKKRPKQDSSHRDDDDDSKPKPNSDLEA
GKNLPFIYGDIPKGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNLL
RRIAIKILIHSYSTLFSMIIMCTILTNCVFMTFSNPPEWSKNVEYSFTGIYTFESLVKII
ARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINLNESFLENGTR
GFDWEEYSNNVSNFYTIPGALDPLLCGNSSDAGQCPEGYTCIKAGRNPNYGYTSFDTFSW
AFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATLEEAEQKEAEFKAMLEQLKRQQEEAQAAAMVTSAGTVSEDAVEDDGRGRMSQSSSEI
SKLSSKSDKERRNRRKKRKQKELLEGEEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGRFRDPGSENEFADDEHSTVEESEGRRDSLF
IPIRGRERRSSYSGYSGYSQGSRSSRIFPSIRRNVKRNSTVDCNGVVSLIGGPASHRPGG
RLLPEVKIDKAATDDSGTTEVEIKKKHTGSLLVSMDQLNASYGRKDRTNSIMTVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIRLKEIVNMIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPEFQDVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINVECVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQIAVIRIKKGIA
WIKAKAHEFMQAHFKQREADEVKPLDELYEKKVNCIANHTGADINRDIDYQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPNGSKEKLDDT
SSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCVQRFKCCQVSIEDGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTMLEYADKVFTYIFILEMLL
KWCAYGFVKFFTNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEERFEIEI
VNNRTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQIATFKGWMDIMYAAVDSRKQE
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNIIQGAVFDFVTQQAFDIIIMMLICFNMVTMMVETDTQSEQ
MSDILWWINLVFVIVFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADLIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPG
SSFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSALVIQRAYRVR
LAKRGFICRKSASTKLENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQLRVEEGRRERA
KRQKDFKESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcagctgcttgcaccaccaggccctgacagttttaaacctttcaccccagag
tctttggctaacattgagaagcgcattgcagaagaaaagaaaaagcgtccaaagcaagac
agcagccatcgggatgatgatgacgacagcaaaccaaaaccgaacagtgacctggaggcg
gggaaaaatttgcctttcatctatggggacatcccgaaaggcctggttgctgtaccactg
gaggactttgacccttattatttgacccagaaaacctttgtagtactaaacagagggaaa
acactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctgctt
aggagaatagctattaaaattttgatacattcatactctacattatttagcatgatcatt
atgtgcactattttgaccaactgtgtattcatgacttttagtaaccctcctgaatggtcg
aagaatgtggagtactcatttactggtatttatacatttgaatcacttgtgaaaattatt
gcaagaggtttctgtatagatggttttactttccttcgcgacccatggaactggctagat
ttcagtgtcatcatgatggcatatgtcacagaatttgtggaccttggaaatgtctcagca
ttgagaactttcagagttctccgagctttgaaaactatctctgttattccaggtttgaag
accattgtgggtgccctaattcagtctgtgaagaaactgtctgatgtaatgattttgaca
gtgttttgcctcagtgtctttgctttaatcggcctgcagctgtttatgggcaatttgagg
aacaagtgtgtaatatggccaattaacctcaatgagagcttcctagagaatggcaccagg
gggtttgactgggaagaatactccaacaatgtctcaaatttttacacaatccctggggcc
cttgatcctttgctctgtggtaacagctcagacgcaggccagtgtccagagggttacaca
tgtataaaagcagggaggaacccgaactatggctacacaagctttgacactttcagctgg
gctttcctagccttatttcgccttatgactcaggatttttgggaaaacttgtatcaatta
accttgcgagcagcaggaaaaacctacatgatattctttgtcctggttatctttgtgggg
tcattctatctggtcaatctgatcttggctgtggtagccatggcttatgaagagcagaac
caggccacactggaggaagcggagcaaaaggaagcagaattcaaggccatgttggaacag
ctgaaaaggcagcaggaagaagcgcaggctgctgccatggtcacttcggcagggacggtc
tcagaagatgctgtggaggatgatggcagggggaggatgtctcagagctcttctgagatt
tccaaactcagttctaagagtgacaaggagcggcgaaatcggaggaagaaacggaagcag
aaggagctgttggaaggagaggagaagtgtgacaatgagaaggtgttcaagtctgaatcg
gaggatggaatgaggagaaaggcctttaggctgccagacaataggctgggaaggaaattt
tccatcatgaaccagtccctcctcagcatcccaggttcccctttcctttcccggcacaac
agcaagagtagcatcttcagcttcagagggcgcttccgtgatccaggctcagagaacgag
tttgctgatgatgagcacagcacagtggaggagagcgaaggcaggcgagactcccttttc
atccccatccgtggccgggaacggagaagcagctacagcggctacagtggctacagccag
ggcagccggtcctcgcggatcttccccagcatccgccggaatgtgaagaggaacagcaca
gtggattgtaatggcgtggtgtccctcattggcggcccggcatctcataggcccggggga
cgccttctgcctgaggtgaaaatagataaggcagctaccgatgacagtggtactacggag
gtggaaattaaaaagaaacataccgggtctctcttggtctcaatggatcagctgaatgca
tcctatggaagaaaggatcgaaccaacagtataatgactgttgtaactaatacccttgta
gaagagttggaagagtcccagcggaagtgccccccctgttggtacaaatttgccaacacc
ttcctgatctgggagtgccatccatattggatcaggctgaaggagatagtgaacatgatt
gtcatggatccctttgtcgacctggccattaccatctgtattgtgctgaacactttgttc
atggcgatggagcaccatcccatgacccctgagtttcaagatgtgctggccgtaggaaat
ctggttttcactggaattttcacagcagaaatgttcctgaagctcatagccatggacccc
tactattatttccaagaaggttggaacatttttgacggatttattgtctccctcagttta
atggaactgggtctagcagacgtggaagggctttcagtgctgcgatctttccgattgctg
agggtcttcaagctggcaaagtcctggcccactctgaacatgctgataaaaatcattggt
aactcagtgggtgccttgggaaacttgaccttggtgctggccatcatcgtgttcatcttt
gctgtggtgggcatgcagctctttggcaagagctacaaggagtgtgtctgcaagatcaac
gtggaatgtgtgctgccccgctggcacatgcacgatttcttccactccttccttattgtc
ttccgtgtgctgtgtggggagtggattgagactatgtgggactgtatggaagtggcagga
caggccatgtgcttgattgtcttcatgatggtcatggtcatcgggaatttagtggtgctg
aacctgttcttggccttgctgctgagctctttcagtgcagataacttagcagcaacagat
gatgatggggagatgaacaacctgcaaatagcagtaattcgcatcaaaaagggaatcgcc
tggatcaaggcaaaagcacacgagttcatgcaggcacatttcaagcagagagaggcggat
gaagtcaaacccttggacgagttgtatgaaaagaaggtgaactgcatcgctaaccacaca
ggcgctgatatcaacagggacattgattaccagaagaacggcaatggcactaccagtggg
attgggagcagtgtggaaaaatacatcatagatgaagaccatatgtccttcatcaataac
cccaatcttacagtccgggtgcccatcgctgtgggtgagtcagactttgaaaacctcaac
acagaagacttcagcagtgatacagatcccaatggcagcaaggagaaactggatgatacc
agctcttctgagggcagcaccattgatataaagccagaggtggaggaagtccctgtggag
gcaccagaagaatatctggaccccgatgcatgcttcacagaaggttgtgttcagcgcttt
aagtgctgtcaggtcagtattgaagatgggctgggcaaatcctggtggatcttgaggaag
acctgctttctgattgtggagcacaactggtttgagacattcatcatcttcatgatcctg
ctgagcagtggagccctggcctttgaggatatttacatagaacagagaaagaccatccgg
accatgctggagtatgcagacaaggtcttcacctacattttcatcctggagatgttgctg
aaatggtgcgcctacggatttgtcaagttcttcaccaacgcctggtgctggctggatttc
ctcattgtggctgtctctttagtcagccttgtagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggacactaagagctttgagacctttaagagcgttgtcccga
tttgaggggatgagggtggtcgtcaacgccctggttggcgctatcccttccattatgaat
gtgttgttggtctgccttatcttctggctgattttcagcattatgggggttaacctgttt
gctgggaaataccattactgctttaacgagactgctgaggagcgctttgaaatagagata
gttaacaaccggaccgattgtgaggcactgatgccgcccaactccactgagatccgatgg
aagaacgtgaaaattaactttgacaatgttggggcaggatacctggctcttctgcaaatt
gctactttcaagggctggatggacatcatgtatgcagcggtagattccagaaagcaagaa
gagcaacccaagtacgaagacaacatctacatgtacatctactttgtcatcttcatcatc
tttggctcctttttcaccctgaacttatttattggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaggatatctttatgacagaagagcaaaagaaatactac
aatgctatgaaaaaattgggctcaaaaaaacctcagaaacctattccccggcctctgaac
atcatccaaggagcagtctttgactttgtcactcagcaagcatttgatataatcatcatg
atgctcatctgcttcaacatggtgaccatgatggtggaaacagacacacagagtgagcag
atgtcagacatcctctggtggatcaacctggtatttgtcatcgtcttcacctgtgagtgc
gtgctgaagatgtttgccctgcggcactattatttcaccattggatggaacatttttgac
tttgtggttgtgattctgtccattgtaggaatgttcctggctgatctcattgagaaatat
tttgtgtcgcccactctcttccgagtcatccgactggcccgtattggccgcatcctgcgt
ctcatcaaaggggccaaggggatccgcactctgctctttgccttaatgatgtccttgcct
gccttgttcaacatcggcctcttgctgttcctggtcatgttcatcttctccatctttggc
atgtcgaacttcgcctacgtaaagcacgaggctggcatagatgacatgttcaactttgag
accttcggcaacagcatgatctgtttgttccagatcaccacctcggctggctgggatggc
ttgctgttgcctatcttgaaccggccgccagactgcgacctagataaggagcaccccggg
agcagcttcaagggagactgtggtaacccctcagtggggatctttttctttgtcagctac
atcatcatctccttcctgatcgtggtgaacatgtacatcgccatcattctggagaacttc
agtgtggccacggaggagagtgctgacccgctgagtgaggatgactttgaaaccttctat
gagatctgggagaagttcgaccctgatgccacgcagttcattgagtactgcaagctggcg
gacttcgccgatgctttggagcacccactccgcgtccctaagcctaacactatcgaactc
atcgccatggacttgcctatggtaagcggggacaggatccactgcctggacatcctgttt
gccttcaccaaacgtgtgctgggggacagtggggagttggacatcctgaggcagcagatg
gaggaacggtttgtggcatctaacccttccaaagtgtcttatgagcccatcacgaccacg
ctccggcgcaagcaggaagaggtctcggcactggttatccagcgggcttacagggttcgc
ttagcaaaaaggggctttatttgccgaaagtctgcctctactaagctggaaaatggagga
acaaatcgggagaaaaaagaaggcaccccgtccactgcatccctcccatcctatgacagt
gtaactaaacctgaaaaggagaaacagctacgggtggaggaaggaagacgagaacgagca
aaaagacaaaaagatttcaaagaatccaagtgttga
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integrated database retrieval system
