Emydura macquarii macquarii (eastern short-necked turtle): 137142040
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Entry
137142040 CDS
T11697
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03030
DNA replication
emq03410
Base excision repair
emq03420
Nucleotide excision repair
emq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137142040 (RFC1)
03410 Base excision repair
137142040 (RFC1)
03420 Nucleotide excision repair
137142040 (RFC1)
03430 Mismatch repair
137142040 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emq03032
]
137142040 (RFC1)
03400 DNA repair and recombination proteins [BR:
emq03400
]
137142040 (RFC1)
DNA replication proteins [BR:
emq03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137142040 (RFC1)
DNA repair and recombination proteins [BR:
emq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137142040 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
AAA_14
AAA_5
RuvB_N
Rad17
AAA_30
AAA_16
nSTAND3
AAA_17
RNA_helicase
AAA_33
AAA_18
AAA_7
AAA_19
Motif
Other DBs
NCBI-GeneID:
137142040
NCBI-ProteinID:
XP_067387309
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MVRNGCCRPGPPFAQPLEEVSPDSPLVQPGGAADIRKFFGVVSTGKKHECEIVKKTEKTK
NGEEISDGKKKTKEIKVKNSSNEDDSKRKQTNKKKRIIYDSDSEEERQSVKKSKKPPERQ
PSSSKSDKVLKKDPVVYVSETDDEDDFIDKKISQKSKENGTSASNCLGTAGVRKEGAKPQ
AKSKPVSPVKLTPTSVLDYFGTGSVQRSEKKLVASKRKEPSQNRDSILEDEAIAKQLQLE
EDSELERQLHEDEEFARTLAMLDETPKKKKARKDPDGKQAISTTNTSSNTTEKHKPSQKG
KTTHSTDDVRNYSAKQQTKSESSRASCSHPEISADKAAEESVNKTLPLKPSSKLVVLKQK
EESNKKERATPSEVTKEKIISGKEEKRTPKKQKVSPQKPESVSPEDSEKKRVNYQAYRSF
LNREGPKALGSKEIPQGAENCLEGMTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKT
NYLIMGRDCGQSKCEKASTLGTKIIDEDGLFDLIQTMPGKKSKYELAAEAEAKKAKSKWD
KTPQKAEPEKRKISLAKKETDPKKSSSTPKKGGTFRFIKKEITEAKKGLDFKQQAVEKKH
DPKAEESCGPEISKGRADGLLWVDKYKPTSLKTVIGQQGDQSCANKLLRWLQNWHKNTSE
DKHAKLGKSGGRDDGTNFKAALLSGPPGVGKTTTAALVCEELGHSYVELNASDTRSKNSL
KDVVAESLNNTSMKDFCSGTSNSVSMKHVLIMDEVDGMAGNEDRGGIQELIGLIKHTKIP
IICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSIAFKEGIKIPPPAMNEIILAA
NQDIRQVLHNLNMWCTKNKSLTYDEAKADASKAKKDIKLGPFDVVRKVFVAGEETAHMSL
IDKSDLFFHDYSLAPLFVQENYVHVKPVAAGGNMKKHLMLLSRAADSISDGDLVDRQIRS
KQNWTLLPTQAIYSSVLPGELMRGYMSQFPNFPGWLGKLSSTGRHDRIVQELAMHMSLRT
HTSKRAVNMDYLSYLRDALVRPLASLGAEGVQDAIAFMDSYCLMREDVENTMEISSWGGK
PSPFSKLDPKVKAAFTRAYNKEAHLTPYALHVVKTSKRQPGSELASELNEELNADDFQPD
EDEQDTIESDAMIKPKKAKTSKPSNAANREETKKGKRKGKK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggtccgaaacggctgctgccgccccgggcctccttttgcccagccgctcgaggaagtt
tccccagactccccgcttgttcagcccgggggggccgcagatatcagaaaattctttggg
gttgtatctactgggaagaaacatgaatgtgagatagtgaaaaagacagagaaaactaaa
aatggagaggagatttcagatgggaagaagaaaacaaaggaaatcaaggtgaagaattca
tctaatgaagatgattccaaacgaaagcagacaaacaagaaaaaaaggataatctatgat
tcagattccgaagaagagaggcagtcagtaaagaaatctaagaagccaccagagagacag
ccatcctcttcaaaatctgataaagttcttaagaaggatcctgttgtttatgtttcagag
acagatgatgaagatgatttcattgataagaagatttcccagaaatccaaggagaatgga
acgtcagcaagcaactgcttaggaacagcaggagtgagaaaggagggtgcaaaaccacaa
gctaaaagtaaaccagtttctccagtaaaactgacaccaacctcagtactcgattacttt
ggaactggtagcgtgcaacgatcagaaaagaaattggtagcaagcaaaagaaaagaacct
tcacaaaacagagattccattctagaagatgaggccattgctaagcaactgcagttagag
gaagattcagagctagagagacagcttcatgaagatgaagaatttgccagaactctggcc
atgttggatgaaacaccaaagaagaaaaaggctcgaaaagatccagatgggaagcaagct
atttcgaccaccaacaccagttcaaacacaacagaaaaacataaaccatctcaaaaaggg
aaaacaacacactcaacagatgacgtaaggaattatagtgcgaagcaacaaactaaatct
gaaagttcaagagcatcttgttcacatccagaaatttctgctgataaagcagcggaggag
tcagtgaataagaccttgcctttgaaacctagctctaagctggtggttctaaaacaaaaa
gaagagagcaataaaaaagagagagcgactccaagtgaagtgacaaaagaaaaaatcatt
tcaggaaaggaagagaagagaacaccaaagaaacagaaagtttccccccaaaaacctgag
tctgtcagtcctgaggactctgaaaagaaacgagtcaactaccaggcatatcgaagcttc
cttaatcgagagggtccaaaggcactaggttccaaagagataccacaaggagctgaaaac
tgcttggagggcatgacgttcgtaattacaggagtcctggaatctattgaacgagatgag
gccaaatctttaattgagcgttatggaggaaaagtaaccggtaatgtcagcaagaagaca
aactatcttattatggggcgtgactgtggccaatctaaatgcgagaaggcatcaacctta
gggacaaaaattattgatgaggatggcctgtttgatctgattcaaactatgccaggcaaa
aagtccaaatatgaattagcagctgaagcagaggcaaagaaagcaaagtcaaaatgggac
aagactccacagaaagctgagcctgaaaaaagaaaaattagcctagctaagaaagaaact
gaccctaaaaaaagcagctctactcctaaaaaaggaggcaccttcagatttataaaaaaa
gaaattactgaagctaagaaaggtctggatttcaagcaacaagctgtggagaagaaacat
gacccaaaggctgaagagagttgtggtcctgagataagcaaaggcagagcagatgggttg
ctgtgggttgataaatataaacccacatctcttaaaacagtaattggacagcaaggggat
caaagctgtgccaataaattattacgatggctccagaactggcacaagaatacttctgag
gacaaacatgcaaaactcggtaaatctggaggcagagatgatggtactaattttaaagcg
gctttgctgtcaggtccaccaggagtaggtaaaacaaccacagctgctctagtttgtgag
gaactggggcacagctatgtggaactgaatgccagtgacactcgcagtaagaacagtttg
aaggacgtggttgctgaatctctaaataacaccagcatgaaagacttctgttccggaaca
tccaattcagttagcatgaaacatgtattgatcatggatgaagtggatggaatggcaggc
aatgaagacagaggaggaatacaggagttaattggtctgatcaaacatacaaagattcct
atcatctgtatgtgtaatgatcggaaccatcccaagattcgttctctggtccattactgt
tttgatcttcgctttcagagacctcggctagaacagattaagggcgccatgatgtctatt
gcatttaaagaagggataaagatacccccaccagctatgaatgagataattctggcagca
aatcaggacattaggcaggttttacataatcttaatatgtggtgtacaaaaaataaatca
ctgacctatgatgaggccaaagctgatgccagcaaagccaaaaaggatatcaaactgggc
ccctttgatgtcgtcaggaaggtttttgttgctggagaggaaactgctcacatgtctctt
atagacaaatctgacctattcttccatgattactctctagcacccctctttgtccaggag
aactatgtacatgtgaaacctgttgctgctgggggtaacatgaaaaagcacttgatgcta
ctgagcagagcagcagacagtatatctgatggtgatctagtcgacaggcagattcgcagt
aagcaaaactggacccttctgcctacacaggccatttattccagtgttctccctggggag
ctgatgagagggtatatgtcacagtttcctaactttccagggtggctggggaaattatca
tccacaggcagacacgaccggattgttcaagaactggcaatgcacatgagtctcagaacc
cacaccagcaagagagccgtaaacatggactatttgtcatatttgcgggatgcacttgtt
agacccttggcaagcttaggagcagaaggtgtacaggatgctatagcgttcatggactcg
tactgcttgatgagagaagatgttgaaaataccatggaaatatccagctggggaggcaaa
cctagtcccttttctaaactggaccccaaggttaaagcagcttttacacgtgcctataac
aaagaagcacatttgacaccctatgcgctgcatgtagtaaagacatctaaacggcagcca
gggtctgagttggcttcagaactgaatgaagagttgaatgctgatgatttccagcctgat
gaggatgagcaagatactattgaaagtgatgcaatgatcaagccaaaaaaggcaaagacg
tccaagccatcaaacgcagcaaatagagaagaaacaaaaaaaggaaagcggaaaggaaag
aaatga
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integrated database retrieval system
