Emydura macquarii macquarii (eastern short-necked turtle): 137142971
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Entry
137142971 CDS
T11697
Symbol
TNN
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq04510
Focal adhesion
emq04512
ECM-receptor interaction
emq04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137142971 (TNN)
04518 Integrin signaling
137142971 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137142971 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emq00536
]
137142971 (TNN)
Glycosaminoglycan binding proteins [BR:
emq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137142971 (TNN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
DUF4998
Pur_ac_phosph_N
EGF_2
Fn3_PBP1
DUF7949
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
137142971
NCBI-ProteinID:
XP_067388625
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MRFWSRLTFPQGMLLYLALQTSAVQLPYESHNCTSNDQKISFGHSXKIDLPKLSQIKVEA
DPLPLKDDSHVLLAAGDADEEEEQNIIFRHNIRVQTPRGDCEALGHIKDLLERMEKMEKE
MMELREACSVQRCYGGGRGVSNCSGHGTFIQEICGCDCEEGWEGSDCSYPSCLNNCNGNG
RCIDGRCICSEPYLGEDCSQRLCPANCSGHGICSNGVCQYYEDFIGNDCSEKRCPNDCSG
NGFCDSGECYCHNGFLGXDCSQVVAPQNVQLLKTTEHSLTFRWDQVIDVDYYLLSYYPIG
HEASAVEIRVPKGQLSYEILGLHPSTKYQITLHYVKKEISNDPEQLQASTALSAVGATWV
TEEMEDSLEVEWENPPTEPDYFKLRFSSLLGQEKEVVVPKSSNPKSRYIIRELVPEKPGM
EKTILHCQSWFFNTVLSNSISKGIDSPTNLVTNRVTEDTVTISWNRVQVPVDRYMVSYTS
ANGDPRERAVGKDQSTTTLTSLKPGMEYIIYIWTEKGDEQSKRANDKAVTEIDSPTNLVI
TQVTEDTATISWNRVQAPTDRYVVSYTSADGDTRERAVGKDQSTTTLTGLKPGMEYTIYI
WAEKGGQQSKRANIKAVTDIDSPISLVTNRVTEDTATISWNRVQAPIDRYVVSYTSADGD
TRERAVGKNNSIATLTGLMPGMEYIIYIWTEKGIKQSRKANTKAVTEIDPPKNLCVSDVT
QSSGVVTWTPPAAQISGYILTYLAPDGTSKEVQLGPNEQRFMLEGLGQGVRYTVYVVAFK
GDCRSRKASNFFSTVAFLYPYPADCSRTQQNGNATSGMYTIYLNGDAGRPMQVYCDMTTD
RGGWIVFQRWNTGQLDFYKHWKNYVEGFGDPMGEFWLGLDKLHNLTSSTPIQYEIRVDLR
TSNGSAYAVYDFFWVASSRDRYRLSVGNYXGGMGPCYMRGVNWVAWKGHEFSIPYTEMKI
RPQSSSNEPILGRKKGSMAGKRKNRA
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagattctggagtaggcttactttccctcaggggatgttactctaccttgcactccaa
acatctgctgttcagctcccctatgaatctcacaactgtaccagcaatgatcagaaaatc
tccttcggccactttaagattgacctacccaagttatcccagatcaaggtggaggcggac
ccattgccactcaaggatgacagtcatgtgctgctagctgctggggatgcagacgaggag
gaggagcagaatatcatattcaggcacaacatccgagttcagacaccaagaggcgactgt
gaagctttggggcacatcaaagacctgctggaaaggatggaaaagatggagaaagaaatg
atggagctcagggaggcctgcagtgtacagaggtgctatggaggaggccgaggtgtctcg
aattgcagtggccatggaactttcatccaagagatctgtggctgtgactgtgaggaaggc
tgggagggcagtgattgctcctaccccagctgcctcaacaattgcaatggcaatggacgc
tgcattgatggcagatgcatctgcagcgagccctatcttggtgaggactgcagtcagcga
ctttgccctgcaaactgcagtggccatgggatctgcagcaatggtgtgtgccagtattat
gaggatttcataggaaatgactgcagcgagaagagatgccccaatgactgcagcggcaat
ggcttctgtgacagcggcgagtgctattgccacaatggtttcttggttgactgctcccaa
gtggttgctcctcaaaatgtgcagctgctgaagaccacggaacattctttgactttcaga
tgggatcaggtgatcgatgtggattattacctcctcagctattatccgatagggcatgag
gcctctgcagtagaaattcgagtgcccaaaggacagctcagctatgagatcctgggcctt
caccctagcacgaagtatcagatcacacttcattacgtgaagaaggagatttccaatgac
ccagaacagctacaagcaagcacagccctgtctgcagttggtgccacctgggtgacagag
gagatggaggactcactggaagtggagtgggagaaccccccaacagagccagactatttt
aagctgaggttcagctcactgcttgggcaggagaaggaggtggtggtgcctaaaagcagt
aaccctaagagcagatatatcatccgtgagttagtaccagagaagccaggcatggagaag
accatcctccattgtcagagctggttttttaacactgtactttcaaactctatctcaaaa
ggaatagacagtccaactaacttggtgaccaaccgagtgacagaggacacagtcaccatc
tcctggaacagggtccaagttcccgtagacagatatatggtaagctacacctcagctaat
ggggaccccagagagagagctgtggggaaagaccagagcaccaccaccctgaccagtctg
aagccaggcatggagtacatcatctacatctggactgagaagggagatgagcagagcaag
agggcaaatgataaagctgtgacagaaattgacagcccaactaacttggtgatcacccaa
gtgacagaggacacagccaccatctcttggaacagggtccaggctcccactgacagatac
gtggtgagctacacctcagctgatggggacaccagagagagagctgtggggaaagaccag
agcaccaccaccctgactggtctgaagccaggcatggagtacaccatatacatctgggct
gagaagggagggcagcaaagcaagagagcaaacattaaagctgtgacagacattgacagc
ccaattagcctggtgaccaaccgagtgacagaggacacggccaccatttcctggaacagg
gtacaggctcccattgacagatacgtggtgagctacacctcagctgatggggacaccaga
gagagagctgtggggaaaaacaacagcattgccaccctaacaggtttgatgccaggcatg
gagtacatcatctacatctggactgagaagggcatcaagcagagcaggaaagcaaacact
aaagctgtgacagaaattgaccctcccaagaacctctgtgtgtcagatgtgacacagtcc
agtggtgtagttacctggacaccgcctgcagcacagatcagtggctacattctgacctac
ctggctccagatggcaccagcaaggaagtgcaactgggtcctaatgagcaaaggttcatg
ttggaaggcctgggacaaggagtgaggtacacagtctatgtggtggcctttaagggagac
tgccggagcagaaaggcatccaacttcttctcgacagttgccttcctctacccataccct
gctgactgcagccggacccagcaaaatgggaatgccaccagtggcatgtacaccatctat
ctgaatggtgatgctggcagacccatgcaggtgtactgtgatatgaccaccgacagaggc
ggatggatagtatttcagaggtggaacacaggacagctggatttctacaagcactggaag
aattatgtagaaggctttggagaccccatgggggaattctggcttggtcttgacaaactg
cataatctcactagcagcactcccatccaatatgagatccgggttgatttgcggacctcc
aacggctctgcctatgctgtctatgacttcttctgggtggcttcgagcagggatagatac
aggctctctgtggggaattactgaggtggcatgggaccatgctacatgaggggggtcaac
tgggtggcatggaaaggccatgagttctccatcccttacactgagatgaagatccgtcct
caatcatccagcaatgaaccgatcctggggaggaaaaaagggtctatggcagggaagagg
aagaacagggcctaa
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