Emydura macquarii macquarii (eastern short-necked turtle): 137143034
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Entry
137143034 CDS
T11697
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emq03041
]
137143034 (DDX43)
Enzymes [BR:
emq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137143034 (DDX43)
Spliceosome [BR:
emq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137143034 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
CMS1
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
137143034
NCBI-ProteinID:
XP_067388720
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MSDWEADSDEESRAGNRPLAPAEWRPPMAPAPGRRSPAPPAGDSGRRGAAGQWAEGEEQG
PARRGGGSQGGWRRLEGSRPFPPRAAAPREPWLSGPREYRPRGPPRDRAQGVPLCFQLDN
TVIGTLIGRAGTKIRELEDSSGSKIQVIRGAHEAEVKIFGSNDTQNKAKMLIDDLVKRCG
QNYRGDRTEKGSFKHQDFGSRCSTEIHCDLIKSGIGPQKSVINWASLRENKAKYEAMKWA
DLPPIERNFYKESPKIASMSQEEVEKWRKENNNIMCDDLKEGEKRHIPNPVSKFEDAFKY
YPDVMANIRKIGFEKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLDSQPI
PKDQRGGPGMLVLAPTRELALQVEAECSKYTYKGIKSICIYGGGDRKGQINMVTKGVDIV
IATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILLDVRPDRQTVMTSAT
WPDGVRRLAKSYLKDPMIVYVGTLDLAAVNTIEQKVVIIPEEEKRAFTRYFIDTMKPKDK
VIIFVGKKLTADDLSSDFSLQGIPVQSLHGNREQCDREQALDDFKKGKVRILIATDLASR
GLDVQDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGEAVTLVTRNDWRIASELINILERA
NQPVPEELISMAERFKQFQLKKEIEKDLGRPHGKARKGF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaagcagacagcgacgaggagtcccgcgccgggaaccgaccgctcgcg
cccgcggagtggcggccgccgatggcccccgccccgggccggaggagcccagcgcccccg
gcgggcgacagtgggcgacgcggagccgccgggcagtgggcggagggcgaggagcagggg
ccggcccggagaggcggcggttcccagggcggctggaggaggctggagggttcgcggccg
ttcccgccccgcgccgcggcaccccgcgaaccctggttgtcgggaccccgggagtatcgg
ccccgcggcccgcccagggaccgggctcagggggtgccgctctgcttccagctggacaac
accgtcatcgggaccctcataggtcgggctggaactaaaataagagaacttgaagattcc
tcaggttctaaaatacaggttataaggggagcacatgaagcagaagtaaagatttttggc
agtaatgatacacagaacaaagccaaaatgttgatagatgatcttgttaagaggtgtggc
caaaattaccgtggagacaggactgagaaaggttccttcaaacaccaggattttggcagt
aggtgttccactgaaatccattgtgatcttatcaagtctggaattggcccacagaaatcc
gtgattaactgggcctctctccgggaaaataaagctaaatatgaagctatgaagtgggca
gatttgcctccaattgagagaaacttttacaaagaatcaccaaagattgcttccatgtca
caagaagaagtggagaagtggcgaaaagaaaataataatatcatgtgtgatgacttgaaa
gaaggtgaaaagcgccacattcccaatcctgtcagtaaatttgaagatgcatttaagtat
tatcctgatgttatggcaaatatcagaaaaattggctttgagaagcctacaccaattcag
tcacaggcttggccaatcatacttcaaggaattgatctcattggtatagcacagactggt
actgggaagacattagcttatttaatgcctggattcattcatttggattcacaaccaatc
ccaaaagatcagcgtggagggccaggtatgttggtccttgctcccactcgagaactagct
cttcaggtggaggcagaatgctcaaaatatacatacaaaggaattaagagtatttgcata
tatggtggtggagaccgaaaaggacaaataaacatggttactaaaggtgtggatattgtt
attgctactcctggtagattgaatgaccttcaaatgaacaacttcataaatctgaagagc
ataacatacttggttttagatgaggctgataggatgctggatatgggatttgaacctcaa
ataatgaagatcttattagatgtacgtcctgacagacaaacagtcatgactagtgctact
tggccagatggtgttcgccgccttgcaaaatcctatttgaaagatcctatgatcgtatat
gttggcactcttgatttagcggcagtaaatacaatagagcagaaagttgttattatccca
gaagaagaaaagagagctttcacacgctacttcatcgatactatgaagcctaaagataaa
gtcatcatttttgtgggaaagaaacttacagctgatgacttatcaagtgactttagtctc
cagggaattccagttcagtctcttcatggcaacagagaacagtgtgatcgagaacaagct
ttggatgactttaagaaaggcaaagtgagaatactgatagctacagatttagcatcccgt
gggcttgatgtacaagatattactcatgttttcaattttgatttccctcggaacattgaa
gagtatgttcatagagtaggacgtactggacgagcaggacgcacaggagaggctgtaaca
cttgtcactaggaatgactggaggattgcatctgagctgatcaacattctggaaagagca
aatcaaccagttcctgaagaacttatttcaatggcagaaagattcaagcaatttcaactg
aaaaaagaaatcgaaaaggatttaggaagacctcatggaaaggcccgaaaaggtttttaa
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