Emydura macquarii macquarii (eastern short-necked turtle): 137144994
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Entry
137144994 CDS
T11697
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137144994 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emq03019
]
137144994 (NDC1)
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137144994 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
137144994
NCBI-ProteinID:
XP_067391639
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAAVAGLAQSRAAGTMRAVGEEQRALLRQVLGWRVAASIAWSVLLLPLCTAAFISISSID
LFHPIQWISNSVNDWYTSYIIFCILLMSVVILIISIFNVEFYAVVPSIPCSRLALLGKII
HPRQVIHSVVHAIMGMLVAWCAAVMTKGKFQFLALPCPASESLDGAVQHMCLNEYHLFLL
LSGAFMGYNYSLLYLVNNMNYLPFPIIQQYKYLRFRRSLPLLVKHSCVESLYLVRNVCVA
YYFFGYIPRAWISTTMDLHTDSKLHPLDTLTGLLDLSLLYHTWLCGIFLLITWHIAWLLF
KIYATEAHHFPVQPTFAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFS
LSQPGGHPHNWTAISKECLSLLSDLTQKLIMQQEAAATNGRVKQPSTGEIGRSLNSTEAA
VTEEMAFQTQRSNVSRAHMPALVKSSLLPLKALSTSDLGSSFGSPFSSPALSRMAGILDL
NSPWHGSVQSPHVMRRGPKLWTSSSDLHMNGSHQESFPVISVARVGNEALQPNFIYTWLQ
NKQEQVRSFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSRLVAASFTEDRFGV
VQTTLPAILNTLLTLQEVVDKHFKLPHASSKPPRISGSLMDTSYKTLRFALRASLKTAIY
RITTTFGEHLNAVQVSAEHKKRLQQFLEFKE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagcgggactcgcgcagagtcgcgccgccgggacgatgagggcggtcggc
gaggagcagcgggcgctgcttaggcaggttttgggttggagagtggctgctagtattgcc
tggtcagtactattgctgcctctgtgtactgcagccttcataagtattagcagcattgac
ttgtttcatcctatacaatggatttcaaattcagtcaacgattggtatacttcctacatc
atcttttgtatcctccttatgtctgtggtgatactgatcataagcatcttcaatgttgaa
ttttatgcagttgtgccttctattccctgctctcgattggcattgttaggaaagattatt
cacccacgacaagttatccattcagttgttcatgctataatgggaatgttggttgcgtgg
tgtgctgcagttatgactaaggggaagttccagttccttgctctaccctgcccggcttca
gaaagcctagatggtgctgttcaacacatgtgcctaaacgaatatcacctcttcctcctg
ctgtctggagctttcatgggctacaattatagtctcttgtatcttgttaacaatatgaac
tatttgccatttccaatcatacagcaatacaagtacttgcgtttcagaagatcgttgcct
ctgctggttaaacatagttgtgtggaatcgctgtacttggttagaaacgtctgcgttgca
tattatttttttggttacatcccaagagcatggataagtactacaatggaccttcataca
gacagtaaacttcatcctcttgacacattgactggtcttctggatctatccttgctctac
catacctggttatgtggtatatttcttctgattacgtggcacattgcatggttactcttc
aaaatctatgctacagaggcgcatcattttcctgttcaaccaacttttgctgaggaaaca
gaccaatgcctacctaaaatcttaaacagcaatcctcccctcatcataaagttcttggcc
ttacaggacttgatgttactttctcagtattctcctgttagacggcaagaagtcttcagc
cttagtcagccaggtggacatcctcacaactggacagcaatatcaaaggagtgcttgagt
cttttgagtgacttgacacagaaactgattatgcagcaggaagctgcagctacaaatggg
agagtgaaacagccatctacaggagaaataggaagatccctgaactctacagaagcagct
gtcacagaagaaatggccttccagacgcaaaggtctaatgtttctagagcccacatgcct
gccttggttaaatcatccctcttgcctttgaaggcgttgtctacatctgatcttggaagc
tcttttggttcacctttcagttctcctgctctcagtcgcatggctggaattctggattta
aactctccttggcatggatcagtccaaagtcctcatgttatgagaagaggaccaaagctg
tggacatcaagttcagatctgcacatgaatggctctcatcaagagtccttcccagtgatc
tctgttgcaagagttggtaatgaagcactacaaccaaactttatttatacatggctccag
aacaagcaagagcaggttcggagtttcttgtcaaaacgagtgctaataatgtatttcttc
agcaagcatccagaagcctcaatccaggccgtcttttctgatgcccaaatgcacatttgg
gcattagaaggtctatctcgtttggtagcggcctcatttactgaagaccgatttggagtt
gtccaaactacactaccagctattctgaataccttactgactcttcaggaggttgtagat
aagcatttcaagctgcctcatgcctctagcaaacctcccaggatttcgggaagtctgatg
gatacgtcctacaaaacgctacgatttgcgcttagagcatccctgaaaaccgcgatatac
cgaataactactacttttggagaacatctaaatgcagtgcaagtgtctgcggagcataag
aaaagacttcagcagttcttggagttcaaagaatag
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