Emydura macquarii macquarii (eastern short-necked turtle): 137147085
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Entry
137147085 CDS
T11697
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq04136
Autophagy - other
emq04140
Autophagy - animal
emq04145
Phagocytosis
emq04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137147085 (ATG16L1)
04140 Autophagy - animal
137147085 (ATG16L1)
04136 Autophagy - other
137147085 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
137147085 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emq04131
]
137147085 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
emq03029
]
137147085 (ATG16L1)
Membrane trafficking [BR:
emq04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
137147085 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
137147085 (ATG16L1)
Mitochondrial biogenesis [BR:
emq03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137147085 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
ATG16
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_NOL10_N
WD40_RFWD3
CFAP251_N
Beta-prop_VPS8
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_NWD2_C
Tricorn_2nd
ASA1
INO80F
PUMA_CC
HEF_HK
DUF8181
Peptidase_M15_4
HTH_6
CCDC93_CC
Tricorn_N
Fez1
YicC-like_N
TMA17_helical
Motif
Other DBs
NCBI-GeneID:
137147085
NCBI-ProteinID:
XP_067394912
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTSGLRTASFPTWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKTDLHAVLADKLQAEK
YDLQSRHEISPGHDGTRNEAQSQEMAHLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAEYLQKISELETECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLVDETSDPAEETSPLRAVSRTSSKRLSQPAGGLLDSITNIFGLSESSLLGHHSSDAAR
RRSLSSFPTPQDNVDAHPGSSKEVRVPTTALFVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDRCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRTESIVQELELFGRITALDLNPERTELLTCSRDDLLKIIDLRVNAVKQ
TFSAQGFKCGSDWTRVVFSPDGSYVAAGSADGVLYIWNVHTGKVERTLGKHHSSSINAVA
WSPAGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgggctcagaactgcgagcttccccacgtggaaacgtcacattgcggaggag
ctaaggcgacgggaccggctgcagagacaggccttcgaagagatcattctccagtataac
aagctgctagagaagactgatctccatgcggtgctggctgacaagctgcaagcagaaaag
tatgacttgcaaagcagacatgagatcagtccaggtcatgatggcacacggaatgaagct
caatcacaggaaatggcccatctgaggattaaacatcaagaggagctgacagagttgcat
aagaagcgtggtgagttggcccagtcagtgattgatctgaataaccaaatgcagcagaaa
gacagagagatgcagatgaatgaagcaaagattgcagaatacttgcaaaagatctctgag
ctggaaacagagtgccaggaactgcgcaacaagctgcaagatcttgagcgagccaatcaa
acactgaaggatgagtatgatgccctccagattaccttcactgccctagaagagaaactg
aggaaaactactgaagacaaccaagagctggtcacacgctggatggcagagaaggctcag
gaagccaataggctcaatgcagaaaatgagaaggactcgaggaggcgacaagccaggcta
cagaaagagctagcagaagctgccaaggaaccactgccagttgaacaggatgatgatatt
gaagtgcttgtggatgaaacctctgatccagctgaagagacttccccactgcgagctgtc
agccggacatccagtaagcgactgtcccagccagccggaggccttctggactctatcact
aatatctttggtctgtctgagtcttcccttttgggacatcactcttctgatgctgccagg
aggcgctctctgtcctcatttcccactccccaggataatgtagatgcacatcctggttcc
agtaaagaagtgagggtgcccactactgcactatttgtctttgatgcacatgatggagag
gtaaatgcagtgcaattcagtcctggttcccggttgctagcaacgggaggcatggatcgc
agagttaaactctgggaagtctttggagataggtgtgagctaaaaggttctctgtctggc
agtaatgcagggattacgagtatcgagtttgacagtgctggctcttacctcttagcagct
tcaaatgacttcgccagcagaatctggactgtcgatgactatcggttacggcacacactg
acaggccacagtgggaaagttctgtcagccaagttcttgttggacaatgcgcgcatcgtc
tcaggaagtcacgaccggaccctcaagctctgggacctgcgcagcaaagtttgtataaaa
acagtatttgcaggatcaagctgcaatgacatagtctgcacagagcagtgtgtgatgagt
ggacattttgacaagaagattcgcttctgggacatcaggactgagagcatagtgcaggaa
ctggaactatttggaaggatcacagctttagacctgaacccagagagaacagagctcttg
acctgttcccgagatgatctgctgaagatcattgatttacgagtcaatgctgtcaaacag
actttcagtgcccagggattcaaatgcggatctgactggaccagagtcgtgttcagccct
gacggtagctacgtggcagctggttcagctgacggggttctgtacatctggaatgtgcac
actgggaaagtagagagaactctcggaaagcatcacagctcctctatcaatgcagtggca
tggtcaccagccggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctgtgg
tctgaattttga
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integrated database retrieval system
