Emydura macquarii macquarii (eastern short-necked turtle): 137148632
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Entry
137148632 CDS
T11697
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137148632 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emq03019
]
137148632 (PATL1)
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137148632 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
137148632 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
137148632
NCBI-ProteinID:
XP_067397648
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MCWYREMIQFPRKGSGRWTRNPTFGHESLEDCPLDEDEDAFQTLGEEDEDIDQFNDDTFG
AGAIDDDWQEAHERLAELVDKPGTAREQEDGAVSDEMDLLGHHEENLAERLSKLVIENEL
EDPAIMQAVQNQPPMQQPGSLNSSIWDGSAVLRRIRGPLLTQEMPSVSVLEYALPQRTPQ
AREDERDLSERALPRRSTSPVIGSPPVRAVPIGTPPKQAAMPNFNQQILCPKPVHIRAPM
QQRFPASYGERMSPNQLCNVPNSSLLGHPFPPSVTPVLTHLQRAQLLGGAQAGRMSPSQF
ARVSGLVGSPLTSMNPKLLQGRVGQMMSPASGFRAFFGAPPPPAPPLSQQQHPPCPGSHL
QNLRPQPQMFRPDTTHLHPQHRRLLYQRQQQNRNQHRSLNGSAGDRAGHRSSHQEQLRKD
PYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYYQKLEKVSAAEEMHGDGPKKERT
KLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKR
RQTLVTIEKTYSLLLDVEDYERRYLLSLEGERPALMEERKQKICDMYDNLRGKMPGQERL
SDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMATARNLPFLIKKDAQDEVLQCLLRP
FSLVLYHLPSGTVTSLLQQLANLPQSATAPAPANLHLTAVLQNKFGLSLLYLVLSRGEEL
QSSHAATELMQDNQWTELMFMATRELLRIPQAALAKPVSTPSNLLSLFSRYVDQQKLNVL
ETKLQLVQGIR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtgctggtatagggaaatgatacaatttccaagaaagggttcaggcagatggactcgg
aatcctacctttgggcatgagtccctggaggactgtcctctggatgaggatgaagatgcc
tttcagaccctgggcgaggaggatgaagatattgaccaattcaatgatgacacatttgga
gctggtgctattgatgatgactggcaggaggcacatgagcggcttgcagaattagtagac
aagcctgggacagctagagagcaggaagatggggcggtcagtgatgagatggacctgctg
gggcaccatgaggagaacctggccgagaggctgagcaagctggtcatcgagaacgagctg
gaagatccagccatcatgcaggctgtgcaaaaccagcctccaatgcagcagccaggaagc
ctcaactccagcatctgggatggatctgctgttctgaggcgcatccgaggaccacttctc
actcaggagatgccctcggtgtctgtgctggaatatgctctgcctcagagaacaccgcag
gcccgggaggatgaacgggacctctcagagcgggcgctgcccaggcgctcaacctcccca
gtcattgggagccccccggtcagggctgtccccattggcaccccaccaaagcaggctgcc
atgcccaacttcaaccagcagattctgtgtccgaagcctgttcacatccgggcaccaatg
cagcagcgttttcctgcctcctatggtgagaggatgtccccaaaccagctctgcaatgtc
ccgaattcctccctcttgggccacccgttccctcccagcgtcactcccgttctcacccac
cttcagagagcacagcttctaggaggagcacaggctggccgaatgtctcccagccagttt
gctcgtgtctctggactcgttggcagccccctcacatccatgaaccccaagttgcttcaa
ggcagagttgggcagatgatgtctccagccagtgggttccgtgccttttttggggcgcca
ccgcctcccgcgccacccctgtcccagcagcagcacccgccgtgtcctgggtcccacttg
cagaacctaaggcctcagccacagatgttcagaccagatacaactcaccttcatccgcag
catcggcggctcttatatcagagacagcagcagaataggaaccagcaccggagtctgaat
ggctcagcaggggaccgagcaggccaccggagcagccaccaggagcagctgcggaaggac
ccctatgccaatctcatgttgcagcgggaaaaggactgggtgtcaaagattcagatgatg
caattgcaaagcactgacccttacctggatgacttctactatcagaattactaccagaag
ctggagaaagtgtcagcggcagaggagatgcatggtgatggccccaaaaaggaacgtact
aaactcatcacaccccaggtggccaagttagagcatgcctacaagccagtgcagtttgag
ggctcgctggggaagctcacagtctccagtgtaaataacccccggaaaatgattgacgcg
gtggtgacttcccggagcgaggatgatgagacgaaggagaagcaggttcgagacaagaga
cgtcagacccttgtcacgattgagaagacgtacagcctcctcctggatgtggaggactat
gagaggcgctacctcctgagcctggagggggagcggccagccctgatggaggagagaaag
caaaagatctgtgacatgtatgacaacctgagggggaaaatgcctggccaggagaggctg
agtgacgaccactttgtgcaaatcatgtgtatccggaaagggaagcgtatggttgcccgg
atcctgcccttcttgtccacggagcaggcggctgacatactcatggcaacagccagaaac
ttgcccttcctaatcaagaaggatgctcaggatgaggtgctgcaatgcctattgaggccc
ttctctcttgttctctatcatcttccatcggggacagtcaccagccttctgcagcagcta
gcgaacctacctcagagcgccacggcgccagcgccagccaacctgcacctcacagccgtg
ctccagaacaagtttggcctgtccctgctgtacttggtcctgagtcgtggggaggaattg
cagagttcccatgctgctacggagctaatgcaggacaaccagtggacggagctgatgttc
atggcaacccgagagcttctgcggatccctcaagcagcgctggcaaagccagtgtccacc
ccctctaacctgctttcccttttttctcgctacgttgatcagcagaagctgaacgtgctg
gagacaaagttgcagttagtacaggggatacggtag
DBGET
integrated database retrieval system
