Emydura macquarii macquarii (eastern short-necked turtle): 137153121
Help
Entry
137153121 CDS
T11697
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03013
Nucleocytoplasmic transport
emq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137153121 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
137153121 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emq03019
]
137153121 (THOC2)
03041 Spliceosome [BR:
emq03041
]
137153121 (THOC2)
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137153121 (THOC2)
Spliceosome [BR:
emq03041
]
Complex C
Other components
EJC/TREX
137153121 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137153121 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
137153121
NCBI-ProteinID:
XP_067404290
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MAAVAGALPAEWIKNWEKSGKSEFLQLCRTLSENKSHENVTFRDIQQALYELAYHVVKGN
LKHDQASNVLSDVIEFRDDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVYECRPEYDEFFVPLIESYMYMCE
PQTLCHILGFKFRFYQEPNGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPVDHAILEEYK
REIVEAKQIVRKLTMVVLSSEKTEEKEKEKDKEEEKTEKPPDNQKLGLLEALLKVGDWQH
AQSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISNLQNKRAPKQ
AESFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTSKKLNSEDRMVKFQS
EGSKQEDKEKMEILFSCLLNITDQVLLPSLTLMDCNACMSEELWGMFKTFPYQYRYRLYG
QWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILS
QIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASF
CGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTG
GEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKL
VGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHH
ISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFW
SLTMYDLAVPHNSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQ
LEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQ
QKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRNIYEKECG
NYPGFLTILRASGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILI
VLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENE
FHHKDPPARNAVAATVQNGPGGAGLPSSLTINAAKLEESTAEETDKLKEKSQGAVKVINK
AANATPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKTPAATPEAKALGKDGKDK
PKEERANKDDKARETKEKTPKSDKEKEKAKKEEKTSKDEKAKIVVTNAESKSAAEKEREK
EPSRERDVAKDMKSKENIKGGEKLPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHS
STVKENLSELKDSSAKHYINHIAPALSKSKEREVEKKDLDKSRERSREREKKDEKDRKER
KRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEKEKNKSKSSGKEK
GDSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSDKHR
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcgggggcgctccctgccgagtggataaagaactgggagaaatcgggc
aagagcgaatttttgcaattatgccgcactctcagtgaaaataaaagccatgaaaatgtg
actttcagagatattcagcaggctctgtatgagcttgcatatcatgttgtcaagggaaac
ctaaagcacgatcaagcttctaatgttctcagtgatgttatagaatttcgggatgacatg
ccctccattcttgctgatgtattctgcatattggatatcgaaacaagttgtttagaagaa
aaaagcaagagagatcattttacgcaacttgtgttagcctgtttgtaccttgtttcagac
accgtcctaaaagaacgtctagatccggaaacattggaatcattagggcttatcaagcag
tctcagcagtttaatcagaaatctgttaaaatcaagacaaaacttttttataaacaacag
aaatttaacttgttaagagaagagaatgaaggttatgcaaagctgattgctgaactgggg
caagatttatctggcaatatcactagtgatttaatcctagaaaatatcaaatctttaata
ggatgttttaacttggatcccaacagagttttggatgttatcttagaagtctatgaatgt
aggccagagtatgatgaattctttgtacctttgatagaatcctacatgtatatgtgtgaa
cctcaaactctatgtcatatccttgggttcaaattcagattctatcaggaaccaaatggt
gaaacaccttcctctttatacagagtcgctgcagtacttttgcaacataatcttatagat
ttggaagatctttatgtacatcttcttccagtcgatcatgccattcttgaagaatacaaa
cgagagattgtggaggctaaacaaattgttagaaaacttacaatggttgttttgtcctct
gaaaagactgaggagaaagagaaagaaaaggacaaggaagaggaaaaaactgaaaagcca
cctgacaaccagaaacttggtttgttggaagctttgttaaaagttggtgattggcaacac
gcacaaagtattatggatcaaatgcctccattttatgccacttcacacaagcctattgcc
attgccctttgccagcttgtacatgtgaccattgagcctctgtaccgcagagttggagta
cctaaaggggctaaagggtcaccaatttccaatttgcaaaataagagagcaccaaaacaa
gcagaaagttttgaagatttgaggaaggaagtgttcaacatgctttgttatctcggtcct
catctttctcacgatcccattttatttgcaaaagtggtgcgcttaggaaaagcatttatg
aaagaggttggaacttcgaagaaactgaacagtgaggacagaatggttaagtttcaatct
gagggaagtaaacaagaggataaagagaaaatggagatcttgtttagctgtttgttaaat
attaccgaccaggttttgcttccatctcttactctaatggactgcaatgcgtgcatgtca
gaggaactctggggaatgttcaaaacttttccataccaataccgctatcgtctctatgga
cagtggaagaatgaaacgtacaacagtcatccactcctagtgaaagttaaagctcaaact
atagacagggccaaatatatcatgaagcgtctaaccaaggaaaatgtgaagccttctgga
agacaaattgggaagttaagccacagcaatccaacaattttatttgattatattttgtca
caaatacaaaagtatgataatttaattacaccagttgttgattctttgaaatacctcact
tcgctgaactatgatgtcttggcatactgcatcattgaagctctggcaaatcccgagaag
gagagaatgaaacatgatgacactacaatctctagctggctgcagagtttagctagtttc
tgtggtgctgtttttcgaaaatatccaattgaacttgctggtctactgcagtatgtagca
aaccaactgaaggctgggaaaagctttgacttgctcattttaaaggaggtagtacaaaaa
atggctggaatagaaattacagaagagatgacaatggagcagctagaggccatgactggt
ggagaacagctaaaagctgagggtggatactttggccagatcagaaacactaaaaaatct
tcacagagattaaaagatgcattgctggaccatgatctggcccttccactgtgcctgctt
atggctcaacagcgaaatggtgtgatctttcaggaggggggcgagaaacatttgaagctg
gtgggaaagctgtatgatcagtgccatgatactctggtacagtttggtggatttttagca
tccaatctaagcacagaggattatattaagcgagtgccttctattgatgttctctgtaat
gagtttcacacaccacatgatgctgcatttttcctctccaggcctatgtatgcacatcat
atttcatcaaaatacgatgaacttaaaaaagctgagaaaggaaacaaacagcagcacaaa
gttcacaagtacatcacatcatgcgagcttgtgatggctcctgttcatgatgctgtgatc
tccttgcaccttcctaaggtttgggatgacatcagtcctcaattctatgctacattttgg
tcattgacaatgtatgaccttgctgttccacataatagctacgacagagaagtcaataaa
cttaaagtccagatgaaagctatagatgacaatcaggaaatgcctccaaataaaaagaaa
aaagaaaaagaacgttgtacagctcttcaggacaagcttcttgaagaggagaagaaacag
ttggagcatgtgcaaagggttctacagaggctgaaactggaaaaggataactggcttctg
gcaaaatctaccaaaaatgagactatcacaaaatttctacagttgtgtatatttcctcgc
tgcattttttctgcaatcgatgctgtttactgtgctcactttgtagaactggtgcatcaa
cagaaaacgcccaatttttccacacttctctgttatgatagagttttctcagatataatc
tatacagtagcaagttgcactgaaaacgaagctagtagatacggcaggtttctatgctgt
atgctagagactgtgactaggtggcacagtgatagaaacatatatgaaaaggaatgtggt
aactatcccggcttccttaccatactacgggcaagtggatttgatggtgggaacaaagct
gatcagttagattatgagaactttagacatgtggtacacaaatggcactataaactaact
aaggcttctgtacactgccttgaaacaggcgaatatacacatatcagaaatatcttgatt
gtgctgaccaaaatccttccgtggtatccaaaagttctgaacttgggccaggccttggaa
agaagagtacataagatctgtcaggaagagaaagagaagagacctgatctatatgcgtta
gctatgggctattctgggcaattgaaaagtagaaagccttacatggtaccggaaaatgaa
ttccaccacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaatgggcca
ggtggtgctgggctgccttcatcactcacaataaacgcagctaaactggaagaaagcact
gctgaggagactgacaaactaaaggagaaatctcagggtgctgtgaaagttattaataaa
gctgccaatgcaacaccaaaagtgacaacaagcaatggaaacagtgcttctaacagcaaa
attattaaagaaaaagatgataaagaaaaaagtgggaaggaaaaagataaagaaaaaaaa
gaaaagactccggctgccactccagaggccaaggcacttggaaaggatggaaaagataaa
ccaaaggaagaacgggcaaacaaagatgataaagcaagagagaccaaggagaaaacacca
aaatctgacaaagagaaggaaaaagccaagaaagaagaaaaaacgtcaaaagatgaaaaa
gccaagatagttgttaccaatgctgagtcaaagtcagctgcagaaaaggagagagaaaag
gagccatcgagagaaagagatgtagcgaaggatatgaaatccaaggaaaatattaaagga
ggagaaaaattaccagtagctgggtccttgaagtcacctgttccccgatcagaaacatca
gagtctgaaagggaacaaaaacgccgcaaagttgatacccattcttctccatcacattcc
tcaacagtaaaggaaaacctcagcgaactcaaggactcctcagcaaagcactacattaac
cacattgctcccgcactgtccaagagtaaggagagagaagtggaaaagaaagatttggac
aagtccagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaggagcga
aaaagggatcattcaaatagtgaccgagaggtgccacaggactcaaccaaaaggcgtaaa
gaggaaaatggaacaactggttcttcaaaacatagtaaaagtgaaagtccatctgattcc
cctcgttcaaatgagaaagaaaaggagaagaacaaatcaaaatcttcaggcaaagaaaaa
ggtgattcaatcaaaactgaaaagatggagaaaagttcctccggtagtaaaaaggaatct
agacatgataaagaaaaaacagaaaaaaaggaaaaacgggacagtgctggaggaaaagaa
gaaaagaaacatcataaatcttcagacaagcatagataa
DBGET
integrated database retrieval system
