Emydura macquarii macquarii (eastern short-necked turtle): 137153175
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Entry
137153175 CDS
T11697
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137153175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emq03019
]
137153175
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137153175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
137153175
NCBI-ProteinID:
XP_067404375
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MATELEPPASGAAPLEAEEDEEQWLYGDDTTCKQEDGPVAGHAESSHPLQDAPQECRPVT
SEDRGMSQQAPPSGEDDDEDSDSDSDEDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYG
TSSSAKLQPKGIDLDATGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKA
YCEKQRRLQLGLDPSPPISSENKITVQQGRTGNAEKEPENNIIKTEFKTEFVTLVGGRMK
AGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGNKPQPPQQPQQP
SQPQQPPQQQPFAPPAGPPPPPIAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLF
PPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYSSADSGFISYPPISTSHTPWVTTVDKST
SNSSSSHWEYSGSRRERERERERERERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFER
DYRRSRDRSREREDRHRERRHREKEESSKHKSSRRKQHDSEEGESHRRHKHKKNKRSKEE
KEASDDGVAEGDEQDAKE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccccctgcctcgggcgcggcgccgctggaggcggaggaggac
gaggagcagtggctgtacggagatgacaccacttgtaagcaagaagatggaccagttgct
ggacatgcagaatcttctcatcctttgcaagatgctcctcaggagtgccggcctgtcacc
agtgaagaccgtgggatgtcacaacaagcccctccgagtggtgaagatgatgatgaggac
agtgatagcgacagtgatgaggatgatgtgaaagttaccattggcaacatcaaaacaggt
gcaccatcgtacatggggacccctatgaatctaaacttaaaaacaggtagaggctatgga
acatcctcttcagccaagttgcagcccaaaggtattgatttagatgccacgggaaatata
aatggattgcctgtaatagaagtggatttagattcgtttgaagacaaaccatggaggaaa
ccaggtgctgacctttctgattactttaattatggcttcaatgaagaaacatggaaggct
tattgtgaaaaacagcgacgtcttcagcttggattggacccctctccacctatcagcagt
gagaataagatcacggttcagcaaggaaggacaggaaatgcagagaaagaaccagagaac
aacattattaaaactgagttcaaaacggagtttgtgactctggtaggagggcgcatgaag
gctgggcctcctcctaataggaagctgggtgggacaattgatgtgattggtggacaggca
ggcactattaggagggtagaaggaagacgccgcgataaacacgcctctgaggaaaatccc
attcaggttcttggagatcatggaaataagccacaacccccacagcagccccagcaacca
tcacaaccccagcagccacctcagcaacagccgtttgcaccaccagcaggtcccccacca
cctccaattgctgggccacccccaccacactttctccaccctccccctccagttacttct
gtcccacctcctctgcatcctccaggcttgccaccaccaggccccattccagggctgttc
cctccacctctggctcctccaccagctctcctcattccaacacttgacggccagcctgct
ggctacaataacaggcagcctccaccgtttggatacagctctgcagattctggcttcatc
agctaccctcctatctccacgtctcatacgccctgggtgacgacagtggataagagcacg
agcaactccagcagcagccactgggagtactcgggttcaaggcgcgagagagagagggag
cgggaaagggaaagggagagagaccgagacagagaccggactccaaccaccagtgaatac
aacaacgatgatgagcgctatcgctactatagccgtgagcgaagctatgattttgagcgg
gattaccgcaggagtcgagaccggagcagggagcgtgaggatcgccaccgggagcgcagg
caccgagagaaggaggagagtagtaaacataagtcttcaagacgtaagcagcacgacagt
gaagagggggaaagccaccggcgccacaagcacaaaaagaacaagcgcagcaaagaggag
aaggaggccagtgacgatggcgttgcagaaggagatgaacaggatgccaaggagtag
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integrated database retrieval system
