Emydura macquarii macquarii (eastern short-necked turtle): 137153402
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Entry
137153402 CDS
T11697
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq04510
Focal adhesion
emq04512
ECM-receptor interaction
emq04518
Integrin signaling
emq04810
Regulation of actin cytoskeleton
emq04820
Cytoskeleton in muscle cells
emq05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137153402 (FN1)
04518 Integrin signaling
137153402 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137153402 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137153402 (FN1)
04810 Regulation of actin cytoskeleton
137153402 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137153402 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emq04131
]
137153402 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emq04147
]
137153402 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
emq00536
]
137153402 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
emq04990
]
137153402 (FN1)
Membrane trafficking [BR:
emq04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
137153402 (FN1)
Exosome [BR:
emq04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
137153402 (FN1)
Glycosaminoglycan binding proteins [BR:
emq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137153402 (FN1)
Domain-containing proteins not elsewhere classified [BR:
emq04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
137153402 (FN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
fn2
Fn3_Dep-1_3rd
Fn3_VIN3
Fn3_Dep-1_2nd
FN3_Tor_3rd
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
137153402
NCBI-ProteinID:
XP_067404802
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MPGSPGWRLLLVALCLGTGVQCSQPKTRRQTQQIVQTPVPSGQNKQGCFDNGRYYQINQQ
WERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKDSMIWDCT
CIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCKPVGQ
RCYDNTAGTSYVVGETWEKPYQGWMIVDCTCLGEGSGRITCTSRNRCSDQDTKTSYRIGD
TWSKKDNRGNLLQCICTGNGRGEWKCERHSSVQTTGIGSGSGSTTFTDVRTALYQPQPQP
QPQPYGHCVTDNGVVYSVGMQWLKTQGSQQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYGGRTFYSCTTEGRSDGHFWCSTTSNFEQDNKYSFCTGQNVLVQTRGGNSNGALC
HFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRV
GDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVGDITYDVNQTFHKRHEEGHM
LNCTCFGQGRGRWKCDPVDQCQDSESRTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQ
PLQTYAGSTGPVQVIITESASHPNSHPIQWNAPEPSHISKYILRWKPKNSRMNWKEATIP
GHLNSYTISGLKPGVVYEGQLISVQQYGHKEVTRFDFTTTSTTPVSSNTLSGETTPLSPV
VATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLL
PGRKYIINVYQISEEGEQNLILSTSQTTAPDAPPEHNVDRVDDTSIVVSWSRPQAPITGY
RIVYAPSVEGSSTELNLPETATSVTLSDLMPGVQYNITIYAVEENQESTPVFIQQETTGV
PHKDAVPSPTDLQFVEVTDVKITILWTPPSSVVSGYRVEVIPLNRPGVHGQKLPSTRNYF
AEVTDLLPGTTYLFKVFAVLHGRESKPLTAEQMTKLDAPTNLRFDNITDSAVLVTWTPPR
APITGYQLTAGPTRGGQQKQYNVGPSATKYTLRNLQPGSEYTVYLVAVKGNQQSSRETAV
FTTLQPMGSVPPYNMDVTETSIVVTWTPAPRIGFKLGVRPSQGGEAPREVISESGSIVIS
GLTPGVEYIYSISVLMDGQDRDSPIIKRIITPLSPPTNLHLESNPDTGVLTVSWDRSTSP
GITGYRVTTVPTSGQQGYTLEEVVGADQNSCIFENLSPGLEYNVSVYSVKDNKESVPVSK
TITQAVPAPTDLRFTNVGPDAMRVTWSPPASIELTSFLVRYSPVKKEEDVAELSISPSDS
MVVLTNLLPGTEYLVSIYSVYEQHESTPLTGVQKTGLDSPTGIDFSDITANSFTVHWIAP
RAAITGYKIRHHLEHSGGRPKEDRIPPSRNSITLTNLAPGSEYVVSIIALNGREESLPLV
GQQTTVSDVPRDLEVTATSPTSLVISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGTVS
TATINDLKPGADYTITVYSVTGRGDSPASSKPVTVTYKTEIDTPSQMQVTDVQDNSISVR
WLPSTSPVTGYRVTSVPKDGHGPTKIKTVPADQTQTTIEDLQPTVEYVVSVYAQGQNGES
LPLVETAVTTIPPPTNLQFVQVTPTSLKVNWNAPNVHLTGYRVRVNPKEKTGPMKEINLS
PDSTFAVVSGLMVATKYEVSVYALKDSLTSRPAHGVVTTLENVSPPRRARVTDVTETTVT
IIWRTKTETITGFQVEAIPTDGQNPIQRTISPDVRSYTITGLQPGTDYKIYLYTLNENAR
SSPVTLDASTGNGTFYLFYIRTEIIHVI
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtagccccgggtggcggctgctgctggttgccctgtgcctggggacaggcgtg
caatgctcgcagcccaaaaccaggaggcaaacccaacaaatagtccagacaccggttcca
agcggccagaataaacagggctgttttgacaatgggagatattatcagataaaccaacaa
tgggaacgaatttacctggggaacacgctagtctgtacatgctatgggggaagcagaggg
tttaactgtgaaagcaagcctgaacctgaagaaacttgctttgacaaatacactggatct
acctatcgggtaggggagacttatgagcgccccaaggactccatgatctgggattgtacc
tgcattggagctggacgtgggagaatcagctgcaccattgcaaatcggtgccatgaaggg
ggtcagtcctataagattggcgatacctggcgcagacctcacgagacgggtggctacatg
ctagagtgtgtgtgtctgggcaacgggaaaggggaatggacttgcaaacctgtaggtcag
agatgctatgataacactgccgggacatcctatgttgttggagagacctgggagaagccc
taccaaggctggatgatagtggactgcacatgcttaggcgaaggcagtggccgtatcacc
tgtacctccaggaataggtgcagtgatcaagacaccaagacttcctacagaattggagat
acctggagcaagaaggataaccgaggaaacctgcttcagtgcatctgcactggtaacggc
agaggcgagtggaaatgtgaaaggcattcatctgtgcaaactactggcattggatctgga
tctggatccacaaccttcacagatgtacgaactgcactttaccaaccccagcctcaaccc
cagcctcagccttacggtcactgtgtaactgacaatggggtggtgtactcagttgggatg
cagtggcttaagacacagggcagtcaacagatgctttgtacttgcctgggcaatggagtc
agctgccaggagacagctgtgacccaaacctatggtggcaattctaatggggagccatgt
gttttgccgttcacctatggtgggaggaccttctattcttgtaccacggaaggtcgatcg
gatggacacttctggtgcagcacaacctcaaatttcgaacaggacaacaaatactccttt
tgtactgggcaaaatgttttggtccagacacggggtggcaactccaacggcgccttgtgc
catttccccttcctgtataacaaccgcaattacacggattgtacttctgagggacggaga
gacaacatgaagtggtgtgggaccacccagaactatgatgctgatcagaagtttggcttt
tgccctatggctgcccatgaagaaatctgcacaaccaatgaaggtgtcatgtaccgggtt
ggagaccaatgggacaaacagcacgacatgggccacatgatgagatgcacttgtgtagga
aatggccgtggcgaatggacctgcattgcatactcccagctcagagaccagtgtattgtt
ggtgacatcacctatgatgtgaaccagacattccacaagcgtcatgaagaaggacacatg
ctgaactgtacatgctttggccagggtcgtgggagatggaaatgtgatcctgtcgaccag
tgccaggattcggaatcccggaccttttatcaaattggtgattcatgggagaagtacgtt
catggcgttagataccagtgctattgctacggccggggcattggagagtggcactgtcag
cctctgcagacctatgcaggttccactgggcctgtgcaagtgattatcacagagagtgca
agtcatcccaactcgcatcctatccagtggaatgcacctgagccctctcacatttccaag
tacattctccgatggaaaccgaaaaacagtagaatgaattggaaagaagccaccatccca
ggtcacttgaactcctacacgatctcaggcctgaagcctggtgtggtgtatgaagggcag
ctcatcagcgtgcagcagtacggacacaaagaagtcacacgctttgattttaccaccact
agtactacacctgtgtctagcaataccctttcgggagagacaactcccctttctcctgtg
gttgctacctctgaatcggtcacagaaattacagccagtagttttgtagtctcctgggtt
tccgcttctgacactgtttcaggattccgtgttgagtacgaacttagcgaagagggggat
gagccgcagtatcttgatctcccgagcacagccacttctgttaacattccggacttgtta
cctggacgcaaatacatcatcaatgtctatcagatctcagaagaaggagaacagaatctg
atcctgtctacttcccagacaacagcccccgatgcacctcctgaacataatgtggataga
gttgatgacacctccattgtcgttagctggagcagaccacaagctcccatcacaggctac
agaattgtctatgccccatcagtggaaggtagcagcacagagctcaacctgcctgagacc
gctacctctgtgaccctcagtgacttaatgcctggtgtgcagtataacatcactatctat
gcggtggaagaaaatcaggagagtactcctgtctttatccagcaggaaaccacaggtgtc
ccacacaaagatgctgttccttcacccacggacctgcagtttgtggaagtcaccgatgtc
aaaatcaccatcttgtggaccccgccatcaagcgtagtgtctggctatcgggtggaagtg
atcccacttaaccgccctggtgtacatgggcagaaactgccttctaccaggaactacttc
gctgaggttactgaccttttacctggaaccacctatctcttcaaggtcttcgcagtgctc
catggcagggaaagcaagccactgactgcagagcaaatgactaaactcgatgcccctacc
aacctacggtttgacaacattactgactctgcagtgctggtgacctggactccaccgcgt
gctccgatcacaggataccaactgactgcaggtcccacaagaggaggtcaacaaaagcag
tacaacgtggggccatctgccaccaaatacacactaaggaacctgcagcctgggtctgag
tacaccgtttaccttgtggcagtgaaaggcaaccagcaaagcagcagagaaactgcggtc
ttcactactttgcagcccatgggctcagtccctccctataacatggacgtgacagaaact
tctattgttgttacctggacacctgcgccaaggattggtttcaagttgggtgtgcgacca
agtcaaggtggagaagccccacgggaggtgatttctgaatctggtagcattgttatctct
ggcctgactcctggagtggaatacatctacagcatttcagtcctgatggacggtcaggac
agagactcaccaatcatcaaaagaataattacaccattatccccaccaactaatctgcat
ctggagtctaaccctgacactggagtcttgaccgtctcctgggatagaagcacgtctcca
ggcatcactggttatcgagttaccactgttcctaccagtggacagcaaggatataccttg
gaggaagtagtcggtgccgatcagaactcctgcatctttgaaaatctgagccccggcttg
gagtacaacgtcagtgtttattctgtcaaggacaacaaggaaagcgtccccgtctccaaa
accatcacgcaagctgttcctgctccaactgatctgcgcttcaccaacgtgggcccagat
gctatgcgtgtgacctggtctcctccagcatccatcgaactgaccagtttcctggtgcgt
tattcacctgtgaagaaagaggaagatgttgctgagttgtccatttcaccctccgacagc
atggtggttttaacaaatctcctgcctggcactgaatatctggtgagcatctatagtgtc
tacgagcagcatgagagcacccctctgactggagtgcagaaaacaggtcttgattctcca
actggcattgacttttcggatataactgccaactctttcactgtgcactggattgctcct
cgtgccgccatcaccggctacaaaattcgtcaccatcttgagcacagtggaggcagaccc
aaggaagaccgtatcccaccttctcggaattccatcactctcactaacctggctccgggg
tctgagtacgtggtcagtattattgctctcaacggcagggaggagagcttgcccttggtt
ggccagcaaactacagtttccgacgttccaagggatctggaagttactgccactagcccc
accagcctggtgatttcctgggatgctcctgcagttacagttagatactataggataact
tatggtgaaacaggtggcaatagcccggtccaggagtttaccgtgcctggcaccgtatcc
actgccactatcaacgaccttaagcccggagcagactataccatcacagtgtactcagtg
acaggccgtggagacagccctgccagcagcaagccggtcacggtcacatacaaaacagag
attgacacaccatcccagatgcaagtgaccgatgttcaggataacagtatcagtgtcaga
tggctgccttcgacttccccagtgacaggttaccgagtgacaagcgtccccaaggatggc
catgggcccacaaaaattaaaacagtccctgcagatcaaacccaaacgaccatcgaggac
ctgcagcccacagtcgagtatgtggttagcgtctatgctcagggtcaaaatggagagagc
ctccctctggttgagaccgccgtgaccacaattcctcctccaacaaacctgcagtttgtt
caggtaacgccaaccagcctgaaagtcaactggaatgcacccaacgttcatctcactggc
tacagagtgcgagtgaatcccaaggaaaagactgggccgatgaaagaaatcaacctctcc
ccagacagcacgtttgctgtcgtgtcaggattaatggtggccaccaagtacgaagtcagt
gtgtatgctctgaaggactctctgactagcaggccagcccatggtgtggtcaccaccctg
gagaatgtcagtcctcctcgcagagcccgtgtgacagatgttactgagacaaccgtcaca
atcatctggcgcaccaagactgagacgatcactggcttccaggttgaagccatcccaaca
gatggccagaaccccattcaaaggaccattagccctgacgttagatcctacaccatcact
ggcttgcagccgggcactgactataagatctacctttacaccttgaacgagaatgcccgc
agttcccctgttacgcttgatgcatccactggtaatggcactttttatttattttacata
agaaccgaaattatacatgttatctga
DBGET
integrated database retrieval system
