Emydura macquarii macquarii (eastern short-necked turtle): 137154528
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Entry
137154528 CDS
T11697
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03013
Nucleocytoplasmic transport
emq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137154528 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
137154528 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emq03019
]
137154528 (THOC5)
03041 Spliceosome [BR:
emq03041
]
137154528 (THOC5)
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137154528 (THOC5)
Spliceosome [BR:
emq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137154528 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137154528
NCBI-ProteinID:
XP_067406352
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSDTSKKRKPKVIRTDGAPQETKRSRAETDQDVKYYSEEAEVELRDPSKDYELYKQTCQ
ELQRLMAEIQDLKSKGSKDSAGAIEERRIQSCMHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVDEFYKEAPPEISKPDITL
NEPHQQTLARLDWELEQRKRLAQKYKECLANKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQANAYGQACDKKLAVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDDSVL
HLIFFYLMNLNVMTVKTKVTTAAEMTTPISAGDLLSPGSLLNCLYPGDHGKRTPNPANQF
QFDKVGILTLNDYVAELGHPYVWVQKLGGLHFPKDQPQHTVSADNSLSASHMEMTMKLLR
TRLQSRLALHKQFASLEHGIVPVSSECQHLFPSKVVSRLVKWAALPYEDYLELSYTKDVV
EAGLAEDTHLYYMALVERGTAKLQAAVVLNPGYSSMPPIVSLCLTWKGEKTNSNDDNIRA
MESEVNVCYRELCGPRPGYQLLTNQLQRLCVVLDVYLETESHDTSVEGPKEFPQEKMCLR
LVRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgacacaagcaagaagaggaaacccaaggtcatccgcaccgatggggcaccg
caggagaccaagcggagcagggctgagactgaccaggatgtgaaatattacagtgaagag
gcggaggtggaactccgcgatcccagcaaagactatgaactctacaagcaaacatgccaa
gagcttcagaggctcatggcagaaatccaggatctgaagagcaaaggcagcaaagacagc
gctggcgcgatagaagagcggcggatccagagctgcatgcacttcatgaccctgaagaaa
ctcaaccgcttggctcatattcgactaaagaaggggagagatcaaacccatgaggcaaag
cagaaagtagatgcctatcacctgcaactccagaacctgctgtacgaggtgatgcatctg
cagaaggagatcaccaaatgcctggagtttaagtcaaaacacgaggagattgagctagtg
agtgtggatgagttttacaaagaggctcctccagaaatcagcaagcccgacatcaccctc
aacgagccccaccaacagaccctggcccgccttgactgggagctggagcagcgcaaaagg
ctggcacagaagtataaggagtgtctggccaacaaggagaagatcctgaaggagatagaa
gtgaagaaggaatatctgagcagcctccagccccggcttaacagcatcatgcaggcttcc
ctccctgtccaggagtatctcttcatgcctttcgaccaggcgcacaagcagtacgagaca
gctagacacttgccaccacctctctacgttctctttgtccaagccaatgcctatggtcaa
gcgtgtgataagaagctggccgtggcaattgaagggagtgtggaagaagccaaagccctc
tacaagccaccagaggactcccaagatgacgagagcgattccgatgccgaagaggagcag
acgacgaagcgtcgccgccccacgctgggggtgcagctggacgacaagcgcaaggagatg
ctgaagagacacccactgtctgttaccatagacctcaagtgcaaagacgatagcgtgctc
cacctcatcttcttctacctgatgaacctcaatgtcatgactgtgaaaaccaaggtgacc
actgctgcagagatgaccacccccatcagcgctggagacctgctgtccccaggctccctt
ctgaactgcctgtatcctggcgatcacgggaagagaactccaaatccagccaaccagttc
cagtttgataaagtcggcatcctgaccctgaatgattatgtggcggagctggggcacccc
tacgtgtgggtgcagaagctgggtggtctgcatttccccaaagatcagcctcagcacacg
gtgagcgccgataactcgctgagtgccagccacatggagatgactatgaagctgctcagg
acgaggctgcagtcccgcctggctctccacaagcagtttgcttcacttgagcatggcatc
gtgccagtctccagtgagtgccagcatctcttcccttccaaggtcgtgtcgcgcttggtg
aagtgggccgcgcttccctatgaggattacctggagctgtcctacactaaagacgtcgtg
gaggctggcttggctgaagacactcacctctattacatggcgctggtggaaagagggaca
gccaagctccaggcagctgttgtgctgaacccgggctactcctccatgccacccatcgtt
agcctgtgtctgacctggaaaggggagaaaaccaatagcaatgacgacaacattcgggcc
atggagagtgaggtcaacgtgtgctacagggagctctgcgggccacggcctggctaccag
ctgctaaccaatcagctgcagcgcttgtgcgtcgtgctggacgtctacctggaaaccgag
tcccacgacaccagtgtggaagggcccaaggagttcccccaggagaagatgtgcctgcgt
ctggtcagggggcccagccggatgaaaccgttcaagtacaaccatcctcaggggttcttc
agtcaccgctga
DBGET
integrated database retrieval system
