Emydura macquarii macquarii (eastern short-necked turtle): 137155028
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Entry
137155028 CDS
T11697
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
emq01002
]
137155028 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emq04121
]
137155028 (USP42)
Enzymes [BR:
emq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137155028 (USP42)
Peptidases and inhibitors [BR:
emq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137155028 (USP42)
Ubiquitin system [BR:
emq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137155028 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
137155028
NCBI-ProteinID:
XP_067407045
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MTIVDKVSESSNPAACQKQPCSSVVPSTGDMDSASASWGAVSSLEVPKHKITLGPVPGAA
VYSSSSVPDKSKPSAQKDQSINDGIAPPQKVLFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQAHITQALSNSGNVIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTIDAMQKACLNGSNKLDRHTQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDITLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRAVLNQQAYVLFYIRSHDMRNGGEH
PHSIHTPGQSSPRPVISQRVVNSRQAASGFIGPQLPPHMIKNSSHLNGTGSLKETPSSSV
ASASNVTLNRPTSAPPSTSTQNWTINRPTIPDPSKKQKITISIHNNKLPTRQTLSQPNLH
NSLENLSKPVPSSTITNSSAVKSTSSAPTMSVATKVSKQTAPSESCSKPLMNGKSKLNSS
TLVPYGAESSEESDEESKGLVKENGHSKSFNGILIGNVVSTLQNSCSSCQDAEEAVSQHV
LPKNVTVNGAISIDSDPEANGLKFDESTCQVKPVKSTEISFSKVNGLHGKIIPTALSPVP
EDRILEAFRYNQLKSLSEEISATGPEKPSKNDGHVETLASGNSTVSYEKSSKVPANLSCN
VQNPCTASDPETISTKEEIAESIVSKTDNAHSDSSGQCNTKKRSLGVDDEFSKQCDAKDY
ADKIRGLQEVKMTLKESPLHVRGSAETTEKLGQSPFIKSDSECSSKKLATLNIIDKCQET
KESANDTDVPPTNDSSVTRLDKVLESHYSKENDELDGSERCEENNDRQKFKSHSPVKENV
CTPKKIDKGHYRTKRERSESEEQEKQTRSKPDSDYSKKRHSYSKERIKQDRYKQQHCNGN
KYKLLHNERNSPSNDRNLGKYTHYRSQSRGKTDQERSRYYHSKRERSWSRERYYQDTPRR
WDKNRYYNDYHPPYTAREDRERKFSHGDRDYDKSSQVYNNRSHKDYYYTSRWNHEPMAKE
REKHHFSSSKIDLYHCSAPSQHSEKYSHEKCAPMSEENNSSFEDSCHKNEYLKDRKRKCA
SVEGSNSDTEKKRRRCLQIEPMEEQKVKKHKKSKKKKKSKDKHREKDDRHHQDSDLSGAC
SDSDIHKHKKKKKKKKKHTKKSEGFIEYLDPHIQKAADSDTNNSKTWEKKGEFNCTDAPP
SEEYSKQGSKWPHEGGDADSCHKTKYIGRGKENSYHISKEYNKAIDLPCHKDHGHTVIKS
LDGNFAYTDETRWKVGEK
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaggtatctgagtcttcaaaccctgcagcttgtcagaagcagcct
tgcagctccgtggtaccctctactggagacatggactcagcctctgcaagttggggtgct
gtatcatctttggaagttccaaaacacaaaatcactttgggaccagtacctggtgctgca
gtttattctagttcatctgtacctgataaatccaagccttcagctcagaaagatcaatct
attaatgatggcattgctccgccacagaaggttctttttccagcagaaaagatttgtctg
aaatggcagcaaacacatagagttggagctggactccaaaatcttggaaatacatgtttc
ctcaattctgctctgcagtgtttgacttacacccccccccttgccaactacatgctttct
catgaacactccaaaacatgccatgaacaaggattctgcatgatgtgtacaatgcaagct
cacattacccaggcactctctaactctggcaatgtcatcaaacctatggctgtcatcaat
gatcttaggcggatagcaaaacatttccgctttggaaatcaggaagatgcacatgaattt
ctacgctacactattgatgctatgcagaaagcttgtttgaatggaagcaacaaattggat
agacatacacaagctaccacgctcatctatcaaatatttggagggtacttaagatctcga
gtaaaatgtatgaactgcaaaggagtctcagatacctttgatccgtaccttgatattaca
ttggagataaagacagctcagagtgtaaacaaagctctggaacagtttgtgaagcctgaa
cagctggatggtgaaaatgcctataaatgtagcaagtgtaagaagatggttcctgcttca
aagaggtttacaatacatcggtcttctaatgttcttacattgtctctgaaacggtttgca
aattttagtggtggaaaaattaccaaggaagtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagaaccaatcatttatgttctatatgcagtcctggtg
catactggtttcagctgtcatgcaggacactactactgctatataaaggccagtaatggg
cagtggtaccagatgaatgattctattgtatccaacagtgacatcagagctgtacttaat
cagcaagcttatgtgctcttttatatcaggtcccatgatatgagaaatggaggagaacac
ccccattccattcatacaccaggacagtcttctccccgtccagttatcagtcagcgggtg
gttaatagcaggcaggctgcatcaggatttattggaccacagcttcctcctcatatgatt
aagaattctagccatttaaatggaactggatcactaaaagaaactccaagcagttctgtg
gcaagtgctagtaatgttaccctaaataggccaacttcagctccaccttcaacttccact
caaaactggacaattaacagacccactattcctgacccttcgaaaaaacagaaaatcact
atcagtattcacaataacaaattgcctactcgccaaactctgtctcaacccaaccttcat
aattctttggagaatctcagcaagcccgttccttcatcaacaattacgaattcctctgca
gtaaagtctacctcaagtgcacctacaatgtcagttgctactaaagtatctaaacaaaca
gctcctagtgaatcttgttctaagccattaatgaatggcaagtctaaactaaactctagt
acgttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggatta
gttaaggagaatggccactcaaaatcttttaatggaattttgattggaaatgtagttagt
acattacagaactcctgttcctcctgtcaagatgctgaagaggctgtatcccagcatgta
ctgccaaaaaacgttacagtcaatggtgctattagtatagatagtgatccggaagcaaat
ggattgaaatttgatgaatccacttgtcaagtcaagcctgttaaatctacagaaatttca
ttttctaaagtgaatggattgcatggaaaaataatacctacagctttgtcaccagttcct
gaagatagaatcttagaggctttcagatataaccagttgaaaagcttgtcagaggaaata
agtgcaactggacctgaaaaaccttctaaaaatgatggtcatgtagaaaccttagccagt
ggcaacagtactgtttcctatgagaagtctagcaaagttcccgctaaccttagctgcaat
gtccagaatccttgtactgcatcagatcctgagaccatatctaccaaagaagaaattgcc
gaaagtattgtatcaaaaactgataatgcacattctgatagcagtggtcagtgtaacact
aagaaaagatccctgggagttgatgatgaattttctaagcagtgtgatgccaaggactat
gcagacaagataagaggactacaagaggtaaaaatgactttgaaggagagtcctttgcac
gtcagagggtctgctgagactacagagaaattggggcaaagcccctttataaagtctgac
agtgaatgtagttctaaaaaacttgcaactctaaacattatagataaatgccaagaaaca
aaggagagtgctaatgacacagatgtaccacctactaatgactcttctgttacaaggttg
gataaagttttagagagtcattattctaaagaaaatgatgaactggatggtagtgaaaga
tgtgaagaaaataatgataggcaaaaatttaagtctcattctccggttaaggaaaacgtt
tgcactcccaaaaaaattgacaaagggcattaccgtactaaaagagagcgctctgagagt
gaagagcaggaaaagcaaaccagaagcaaaccagatagtgattattccaaaaaaaggcac
tcctacagcaaggagaggattaaacaagatcgctataagcagcagcactgtaatggaaat
aagtacaaacttctgcataatgaaagaaacagccctagtaatgacagaaatttaggaaaa
tatacccattatagatcccaaagtagaggaaaaactgatcaggagaggagtagatattac
cattccaaaagggaaaggtcttggagtagggaaagatattaccaagatacaccgaggaga
tgggacaagaacagatattataatgattatcatcctccttatacagcaagagaggatcga
gagagaaaattctctcatggggacagagactatgacaaatcaagtcaggtttacaataat
aggtcacacaaggattattattacacaagcagatggaatcatgaaccaatggctaaagag
agagagaaacatcatttcagcagctccaaaatagacttatatcattgctcagctccctct
cagcactctgaaaaatattcccatgaaaaatgtgcacccatgtctgaagaaaacaattca
agttttgaggattcttgccacaaaaacgaatatctaaaagacagaaaaagaaaatgtgct
agtgtagaaggtagtaacagtgatacagaaaagaaacgcagaagatgtttgcagattgag
ccaatggaagagcaaaaagtgaaaaaacacaagaagtccaagaaaaaaaagaagtctaaa
gataaacaccgagaaaaagatgacagacatcaccaggattcagacttatctggggcctgc
tctgattctgacatccacaaacataagaaaaagaagaagaaaaagaagaaacatacaaag
aaatctgagggctttattgaatatttagatccccatatccagaaggctgctgactctgac
actaataactctaagacatgggagaaaaaaggagaatttaattgtacagatgcccctcca
tctgaagaatatagtaaacaggggagtaaatggcctcatgagggaggggatgctgattcc
tgtcataaaacaaaatacataggaagaggcaaggaaaatagctatcacatatctaaagag
tataataaagctatagacctaccttgtcataaggaccatggacacacagtcattaaatct
ttggatggcaactttgcatacacagatgaaaccagatggaaagtgggtgaaaagtaa
DBGET
integrated database retrieval system
