Emydura macquarii macquarii (eastern short-necked turtle): 137158863
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Entry
137158863 CDS
T11697
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03015
mRNA surveillance pathway
emq04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137158863 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
137158863 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emq03021
]
137158863 (SYMPK)
03019 Messenger RNA biogenesis [BR:
emq03019
]
137158863 (SYMPK)
Transcription machinery [BR:
emq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137158863 (SYMPK)
Messenger RNA biogenesis [BR:
emq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137158863 (SYMPK)
U7-dependent histone pre-mRNA processing factors
137158863 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_MROH2B_C
Cnd1
PDS5
Adaptin_N
INTS7_N
Motif
Other DBs
NCBI-GeneID:
137158863
NCBI-ProteinID:
XP_067412917
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MASGTGDGSNARMSIASQFFTQEEGSGTDSMTTSERVVDLLNQAALISNDSKINLLKQVQ
ELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLK
DENVNVVKKAILAMTQLYKVALQWMVKSKVINDLQEACWEMVSAMASDIILLLDSDNDGI
RTHAIKFVEGLIITLSPRMPDSDVPKRHESDISLDRIPKDHPYIKHNVLWEEGKAALEQL
LKFMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRK
NLKLHLLSVLKHPSSVEFQAQITTLLVDLGTQQAEITRSMPNLKEPRKRPRDESDAALKK
MKMEPPLGEDDEDKDLEQAAVPVPKPSGQTSTHSDTDITAEFLQPLLTPDNVANLVLISM
VYLPDTMPASFQATYTPVESAGTDAQIKHLSRLMATQMTAVGLGPGVEHTKLLKEEPKEE
KLAKPESVLIKRRLSSLSQGQAISVLGAQGCVTILLEPEAPQAKRRPEPIIPSTQPRLAG
ASGRKKVFRLSDVIKPLSDVQMEKLKLGAVKRILSSERAVACSGAAQARVKILSSLVTQF
DMPLKSEVLAFILDDIRNRLDLAFAWLYQEYNIYLSKYPAGSLGSYDECLIGLLSGLQEK
PDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHV
LLDLSSHEKDKVRQQAILFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDT
EVAAPWTEETVRQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVVEQPIRGMGM
NSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLN
GLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSAVSPLNPGELLIALHNIDSAK
CDMKSIIKATNLCFGERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFV
MNVLSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFEKCPELREPLL
VHVRSFTPHQQAHVPNSTMAILEASSKLEVEVNDSQPLEEEELEPAPLLPRMSQDMIALR
LAQEKALKRQLEEEQRLKQPAGPPRPAHALPPLPAEESMDFREEGPEVEMPTIFISMQEE
EEGSGGDGSLLDTSVEGPPPAKELKSKEAGTSGTPDKEAESKTETLTPDEPAPGRPQPAS
QPEEQPEPSAAQEQKAES
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcacaggggatggcagcaacgcccgcatgagcatcgcctcccagttcttc
actcaggaggagggcagcggcacagacagcatgacaacctcggagagggtggtggatctg
ttaaaccaagctgccctgatcagcaacgactctaaaatcaacctcctcaaacaggtccag
gagctgattataaacaaggaccccacgctgctggataacttcctggatgagatcatcgcc
ttccaggcagacaagtccattgaggtgcggaagtttgtcatcggcttcatagaagaggcc
tgcaaacgggacatcgagctgctgctgaagctcatcgccaacctgaacatgctgctgaag
gatgagaatgtcaacgtggtgaagaaggccatccttgccatgacccagctctacaaggtg
gcgctgcagtggatggtgaagtccaaagtgatcaacgacctgcaggaggcctgctgggag
atggtgtcggccatggccagcgacatcatcctactgctggactcggacaacgacggcatc
cgtacccatgccatcaagtttgtggaggggctgatcatcacgctgtcaccccgcatgccc
gactcggacgtgcccaagcgccacgagagcgacatcagcctggaccgcatccccaaggac
cacccctacatcaaacacaacgtgctgtgggaggaaggcaaggcggccctggagcagctg
ctgaagttcatggtgcacccagccatctccagcatcaacctcacggcggcactgggctcc
ctggccaccatcgcccgccagcggcccatgttcatggcagaggtcatccaggcctacgag
accctgcacgccaacctgccgcccacgctggccaagtcgcaggtgagcagcgtgcgcaag
aaccttaagctgcatctactgagcgtgctgaagcacccctcgtccgtcgagttccaggcg
caaatcaccaccctgctggtggacttgggcacccagcaggcggagatcacccgcagcatg
cccaatctgaaggagccacgcaagcgcccgcgtgatgagagtgacgcagccctgaagaag
atgaagatggagccacccctcggggaagacgacgaggataaggacctggagcaagcggct
gtgccagtgcccaagccctctggccagaccagcacccattcagacacggacatcacggcc
gagttcctgcagcccctgctgacaccagacaatgtggccaatctggtgctgatcagcatg
gtgtaccttcccgacaccatgcctgcctccttccaagccacctacacccccgtggagtcg
gccggcacggacgcccagattaagcatctctcacgcctgatggccacccagatgacggcc
gtagggcttgggccgggtgtggagcacaccaaactcctgaaggaggagcccaaggaggag
aagctggcgaagccggagagtgtgctgatcaaacggcgcctgtcctcgctgtcccagggc
caggccatctctgtgctgggggcacagggctgtgtcaccatcctcctggagccagaggcc
ccacaggccaagcggcgcccggagcccatcatcccatccacccagcccaggctggcaggc
gccagcgggcgcaagaaggttttccgcctgagcgacgtgatcaaaccattgtcggacgtg
cagatggagaagctgaagctgggagccgtgaagcggatcctgagctcagagagagccgtc
gcctgcagcggggcagcccaggcccgtgtcaagatcctctcatccctggtgacccagttc
gacatgcccctgaagagcgaggtcttggccttcatcctggatgacatccgcaaccgtctg
gacctggcctttgcctggctctatcaggagtacaacatctacctgagcaagtaccctgcc
ggctccctgggcagctatgacgagtgcctcatcggcctgctctctggcctgcaggagaag
ccagaccagaaggatgggatcttcaccaaggtggtgctggaagccccactgatcacagag
agcgcgctggaggtgatccgcaagtattgcgaggatgagagccgcacctacctggggatg
tccaccctccgggacctgatcttcaagcgcccgtccaggcagttccagtatttgcacgtg
ctgctggaccttagctcccatgagaaggacaaggtccgccagcaggcgattctcttcatt
aagcgcatgtacgagaaggaccagctgcgggagtacgtggagaagttcgcgctgaactac
ctgcagctcctggtgcaccccaaccccccgtcggtgctctttggagccgacaaggacaca
gaagtggccgctccctggaccgaggagaccgtgaggcagtgtctgtacctctacctggcc
ctgctgccgcagaaccacaagctgatccacgagctggcggcagtctacaccgaggccatc
gctgacatcaagcgcacggtgctgcgggtcgtcgagcagccgatccgtgggatggggatg
aactccccggagctgctgctgctggtggagaactgtcccaaaggggctgaaaccctggtg
acccgctgcctgcacagcctgacagataaagtgcccccgtctcccgagctggtgaagcgg
gttcgcgatctctaccacaagcggctcccagacgtccggtttctcatccccgtcctcaac
ggcctggagaagaaagaggtgatccaggctctgcccaagctcatcaagctgaaccccatc
gtggtgaaggaggtgttcaaccgcctcttggggacgcagcatggcgaagggaattcggct
gtgtcccccctgaaccctggggagttgctgattgccctgcacaacatcgactccgccaag
tgtgacatgaaatccatcatcaaagccaccaacctgtgcttcggcgagaggaacgtctat
acgtcggaggtgctggccgtggtgatgcagcagctgatggagcagagccccctgcccatg
ctgctgatgaggacggtcatccagtcgctgaccatgtacccgcgcctgggtggcttcgtc
atgaacgtcctgtctcgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggag
ggcttcatcaaatgctgccagcgcaccaagccccagtccttccaggtcatcctgcagctc
cctccgcagcagctcagtgccgtcttcgagaagtgccccgagctgcgggagcccctgctg
gtccacgtccgctccttcaccccgcaccagcaagcgcatgtccccaactccaccatggcc
atcctggaggccagcagcaagctggaggtggaggtgaatgactcccagccactggaggag
gaggagctggaacctgcacccctcctcccacgcatgtcccaggacatgatcgcgctgcgc
ctggcccaggagaaggcgctcaaacgccagctggaggaggagcagagactgaagcagccg
gctggccccccacgccctgcacatgccctgccacctctgcctgctgaggaatccatggac
ttccgggaggaggggcccgaggtggagatgcccaccatcttcatcagcatgcaggaggaa
gaggagggctcgggcggagacggctccctgttggacaccagcgtggaggggcccccgcca
gcaaaggaactgaagagcaaggaagcaggcaccagcggcacaccagacaaggaagctgag
agcaagactgagaccctcacaccagacgagccagcgcccggcagaccccagccagccagc
cagccggaggagcagccggagcccagtgcagcgcaggagcagaaagcagagagctga
DBGET
integrated database retrieval system
