Emydura macquarii macquarii (eastern short-necked turtle): 137166140
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Entry
137166140 CDS
T11697
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137166140 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
137166140
NCBI-ProteinID:
XP_067423864
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MQRAPPAWALKRVSEGEAAGPGTPPRLRARFQALLFALGCRIQRHCRKVLLGGLLAFGAL
ALGLRVAAIETDLEQLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKREGENILTQ
EALELHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPL
DCFWDGAKLQGGSAYLPGRSDIQWTNLDPAQLLEELGQFTSLEGFRELLHKAQVGQAYVE
RPCLDPHEPECPASAPNRQSRQRPDIPAELAGGCHGFSRKFMHWQEELILGGATRDAQGR
LLSAEALQSMFLLMSPRQLYEHFKDDYEIQDIGWSEAKAAAVLESWQRKFVELAQETLPQ
NSSQRVHAFSTTTLSDIMKSFSDVSVLRVAGGYLLMLAYACVTLLRWDCSKSQGAVGLAG
VLLVALSVASGLGLCSLLGITFNAATTQVLPFLALGIGVDDMFLLAHAFSETSQHVPFKE
RTGECLRRTGTSVALTSISNMIAFFMAALVPIPALRAFSLQAAVVVAFNFAMVLLIFPAI
LSLDLHRRRDKRLDVLCCFYSPCSSRLIQTQPQEFADTNDNRATHPSPYGPPVGAPSTQI
TATVQAFTRCDSTGRHFVTVLPPAAQVCTAPPADPLGSQLFAPASSTRDLLAQLDGKGGR
ECVPLPLCHWNLADFAREKYAPLLLQTQTKGIVVLLFLALLGLSLYGTTLVHDGLYLTDI
VPRGTREHAFLAARLKYFSSYHVFVATTGGFPYPSSQEALYSLHRALGALPHVVRDQRRQ
LPRMWLHYFQDWLQGLQAAFDRDWQAGRITRDSYRNGSEDGALAYKLLLQTGSKKEPLDY
SQLTTRRLVDENGIIPPDTFYICLTVWVSSDPLGVAASQASFYPPPPEWLHDKYDATGEN
LRIPAAQPLEFAQFPFYLSGLRQTSDFVEAIESVRAVCEAAARERGVASYPSGYPFLFWE
QYLGLRHCILLAVGIALACTFLVCAALLLSPWTASIIVAVLAMTTLELFGVMGLLGIELS
VIPAVILVASVGIGVEFTVHVALGFLTAMGSRTLRSALALEHTLAPVLDGALSTLLGLLL
LAGSEFDFILRYFFAVLTALTVLGLLNGLVLLPVLLSIIGPPAEVTPGDSSSRPPSPEPR
PPALSHHAFYVRRPPAWPSAFADAPDAETPAQPYDPGAYVLPPAPPRVLVQASKNPGFPT
ITVVKTYPESQEPPNDPLPAPAACPGLKDMPPHRPPRPGWPCPPGAQPAPHRAPQPLRTA
LPAYGGPYATVTATASVTVALQPPLPGSVRRYTHEGYEGSESECPEQTAPPACSAHGSAA
PASCQLQHLDRAEASTP
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgccccgccggcctgggcgctgaagcgggtctccgagggcgaggccgcgggc
cccgggaccccgccgcggctgcgggcccgattccaggcgctgctcttcgcgctgggctgc
cgcatccagcggcactgccgcaaggtgctgctcggggggctgctggccttcggggcgctg
gcgctgggcctgcgggtggccgccatcgagaccgacctggagcagctctgggtggaagcc
ggcagccgtgtcagccaggagctcaggtacacgaaagagaagctgggggaagaatccgtc
tacacgtcccaaatgctgatccagaccccgaaacgggaaggggagaacatcctcacccag
gaggcgctggagctgcacctcgaggcggccctggccgccagcaaggtgcaagtctcgctg
tacggaaaatcctgggatttgaacaaaatctgctacaagtccggcgtccccatcattgag
aacggcatgatagagcggatgatcgagaagcttttcccctgcgtgatcctgaccccgctg
gattgcttctgggacggtgccaaactacaagggggctctgcctaccttccgggccgctcg
gacatccagtggaccaacctggaccccgcgcagctgctggaggagctgggccagttcacc
tcgctggagggcttccgggagctgctgcacaaggcacaggtggggcaggcctacgtggag
cggccctgcctcgacccccacgagcccgagtgccccgccagcgcccccaacaggcagagc
cggcagcgccccgacatccccgccgagctggccggcggctgccacggcttctccaggaag
ttcatgcactggcaggaggagctgatcctgggcggcgccacgagggacgcgcagggccgg
ctgctgagcgcggaggccctgcagagtatgttcctgctgatgagcccccggcagctctac
gagcacttcaaggacgactatgagatccaggacatcggctggagcgaggcgaaggcagcg
gccgtcctggagtcctggcagaggaagttcgtggagctggcgcaggagaccctcccgcag
aacagctcccagcgggtccacgccttctccaccaccacgctcagcgacatcatgaaatcc
ttctcggacgtgagcgtcctccgcgtggccgggggctacctcctgatgctggcgtacgcc
tgcgtgaccctgctgcgctgggactgctccaaatcccagggggccgtgggcctggccggc
gtcctgttggtggccctctccgtggcgtcggggctggggctctgctcgctgctcggtatc
accttcaatgcagccaccacccaggtgctgccgttcctggccctgggcatcggggtggac
gatatgttcctcctggctcacgccttcagcgagaccagccagcacgtccccttcaaggag
cggacaggcgagtgcctgaggcgcacgggcaccagcgtggcgctcacctccatcagcaac
atgatcgccttcttcatggccgccctggtgcccatccccgccctgcgcgccttctccctg
caggccgccgtggtggtggcgtttaacttcgccatggtgctgctcatcttcccggccatc
ttgagcctggacctgcaccggcgccgggacaagcggcttgatgtcctctgctgcttctac
agcccgtgctcctcccgcctcatccagacccagccgcaggagttcgccgacaccaacgac
aaccgtgccacccacccttcgccctacgggcccccggtcggggcccccagcacccagatc
actgccacggtgcaggccttcacccgctgcgactccacgggccggcacttcgtcaccgtc
ctgccgccagccgcccaggtctgcaccgcgccccccgccgacccgctgggctcccagctc
ttcgccccggccagctccacccgtgacctgctggcccagctggatgggaaggggggccgg
gagtgtgtcccactgcccctctgccactggaatctggctgacttcgccagggaaaagtac
gccccgctcctgctgcaaacccagaccaagggcatcgtggtgctgctgttcctggcgctg
ctggggctcagcctctacggcaccaccctggtgcacgacggcctgtacctgacggacatc
gtgccgcggggcacaagggagcacgccttcctcgccgcccgcctcaagtacttctcctcc
taccacgtcttcgtcgccaccacgggcggcttcccctaccccagctcgcaggaggcgctc
tacagcctgcaccgggccctgggcgccctgccccacgtggtgcgcgaccagcgccgccag
ctgccccgcatgtggctgcactacttccaggactggctgcaaggcctgcaggccgccttc
gaccgggactggcaggccgggcgcatcacccgggacagctaccgcaacggctccgaggac
ggcgcgctggcctacaaactgctcctccagacgggcagcaagaaggagccgctcgactac
agccagctgaccacgcggcgcctggtggacgagaacggcatcatcccgcccgacaccttc
tacatctgcctgaccgtgtgggtcagcagcgaccccctgggcgtcgctgcctcccaggcc
agcttctaccccccgccccccgagtggctgcacgacaagtacgacgccaccggggagaac
ctgcgaatccccgcggcccagcccctggagttcgcccagttccccttctacctgagcggc
ctgcgccagacctcggacttcgtggaggccatcgagagcgtgcgggccgtgtgcgaggcg
gcggcccgggagcgcggcgtggccagctaccccagcggctaccccttcctcttctgggag
cagtacctcggcctgcgccactgcatcctgctggccgtgggcatcgcgctggcctgcacc
ttcctggtgtgcgccgccctcctgctcagcccctggaccgccagcatcatcgtggccgtg
ctggccatgacgaccctggagcttttcggggtcatggggctgctgggcatcgagctgagc
gtcatcccggccgtcatcctcgtcgcctcggtgggcatcggggtggagttcaccgtccac
gtggccctggggttcctgacggcgatgggcagccggacgctgcgctcggccctggcgctg
gagcacacactggcgccggtgctggacggggcgctctccacgctgctgggcctgctgctg
ctggccggctccgagttcgacttcatcctgaggtatttcttcgccgttctcaccgccctg
accgtcctggggctcctcaacggcctcgtgctgctgcctgtcctgctgtcgatcatcggg
cccccggccgaggtgaccccgggggacagcagcagccgcccgccctcaccagagcccagg
cccccggcgctcagccatcacgccttctacgtgcggcgccccccggcctggcccagcgcc
ttcgccgacgccccggatgcggagacccccgcccagccctacgaccccggcgcctacgtc
ctgccgcccgccccgccccgtgtcctggtgcaggccagcaagaaccccggcttccccacc
atcacggtggtgaagacctacccggagagccaggagccgccgaacgaccccctccctgcc
cccgcggcctgcccgggtctcaaggacatgcccccccacaggccgccccggccagggtgg
ccctgcccacccggcgcccagcctgccccgcacagagccccccagcccctgcggactgcc
ctccccgcctacggcggcccctacgccacggtgacggccacggcctcggtgacggtggcc
ttgcaaccccccctgcccggctccgtccggcgctacacgcacgaggggtacgagggcagt
gaatcggagtgcccggagcagaccgccccgcccgcctgcagtgcccacggctcggccgcg
cccgcgagctgccagctccagcacctggaccgggccgaggccagcacgccctag
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