Eubacterium maltosivorans: CPZ25_001170
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Entry
CPZ25_001170 CDS
T05996
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
emt
Eubacterium maltosivorans
Pathway
emt03030
DNA replication
emt03430
Mismatch repair
emt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
emt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPZ25_001170 (polC)
03430 Mismatch repair
CPZ25_001170 (polC)
03440 Homologous recombination
CPZ25_001170 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emt03032
]
CPZ25_001170 (polC)
03400 DNA repair and recombination proteins [BR:
emt03400
]
CPZ25_001170 (polC)
Enzymes [BR:
emt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPZ25_001170 (polC)
DNA replication proteins [BR:
emt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPZ25_001170 (polC)
DNA repair and recombination proteins [BR:
emt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPZ25_001170 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DEDDh_C
DUF655
DNA_pol_A_exo1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QCT69974
UniProt:
A0A4P9C422
LinkDB
All DBs
Position
223777..227886
Genome browser
AA seq
1369 aa
AA seq
DB search
MDALNPIIHKQNDLEELIKKYGLKPQRVEVNSASQELVFTFKTRIPECDSISVQRELVDI
FDYTKSLSVIISPEDEGNKETGTKQSVHKLMENVDYDALAKKKEDALNKRLKVIKDTPPA
KAGSGASGKKDGKEEEARVLGVGEVVMGDRIKRPAQSMGEIDFSTGAVLDSTNIVVSGRV
FGIDSREITDKTTLFTFNITDEHGSVSCKIFARKKNVGMIKENLKKDRWFKVEGNINYDE
YSHEKVLTPKNMEVAAAPVRRDNAEEKRVELHLHSQYSSMDAVSKVAKIMKQANDFGHDA
IGITDHGVLQAYPEMMSLSKKYGIKVLYGVEGYLVDDDQYIVTGEQNESFEGEFVFFDLE
TTGLIPGKDNIIEIAAVKIKNKHIVDTFSKIVNPHRPIPPFITNLTGITNQMVEAGEEEA
AAVRAFHEFCGDLILVAHNAKFDMGFMEIALNAHHLENNITYIDTLAMSRTLIPTINKHN
LKKLASYFKVDMGHHHRALDDSVCSAKIFVKLMELAQKQDVDEVAGLNGLMDVEQIIKSG
DTYHIIIYAKNQAGLKDLYKLVSEAHINYFYRRPRIPKSLLAAHRENLIIGSACEAGELY
KAVLKNVPKNRLDEIADFYDYFEVQPLGNNEYLLRNETVHSMEELADVNRRIIELGREKG
KLVVATGDVHFVDPSDAYFREILQAGQGYKDSHEQPPLYYRSTQEMLDEFTYVDPQTAYE
LVVTNPRRVAELFDDVKPIPDGTFPPIIEGSDDEIRDMVYKKAHEMYGDPLPDIVEQRVK
RELDSIIGNGYSVLYLIAQKLVHHSLEDGYLVGSRGSVGSSLVAMLCGITEVNSLAPHYV
CPNCKHYEFFDSTKVGVGPDLPNADCPECGHPMNKDGFDIPFETFLGFEGDKEPDIDLNF
SGENQPEAHHYTEVLFGEGKVYRAGTIATLADKTAFGYVKNFFDENGVTAPRAEMERVIE
GCAGVKRTTGQHPGGVMVVPKDKDIYDFTPIQYPADDRECGTMTTHFDYHSISGRLLKLD
ILGHDDPTMLRMLKDITGLDPQEIPLDDEKVISLFTGTSALDLKEDDFDIPLGTCGIPEF
GTNFVRQMVLDTKPTAFSDLIRISGLSHGTDVWTNNAQDLVRSGTATIKDVICTRDDIML
GLISMGLAPKESFSIMEHVRKGKGLTDEEEAYMKENNVPAWYIDSCKKIKYMFPKAHAAA
YVMMAFRIAYYKVYYPLAYYATYFSIRAKEFNLEKMTNGKETVKKTLAEIRAQGNKASNK
DQQLLTSLELALEMYCRGFGFKNVDVYESHYSEFKIVGNELLPPLNAIDGLGDKAAMQIY
EEAQKRPFISKEDLQTRAKVNKSNIEKLEQFGCLNSLPDSNQMSFMSMF
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
gtggacgccttgaatccgattatacacaaacaaaatgatttggaagaactcattaaaaaa
tacgggcttaagccccagcgtgtcgaggtgaattctgcgagccaggagctggtttttacc
tttaaaacccgaattcctgaatgtgacagcatctcggtccagagagagctcgtggatatt
tttgattataccaagagtctgagcgttattatctcgccagaggatgagggaaataaagaa
accgggacgaagcagtcagtccacaagcttatggaaaatgtggattatgacgcgctggcc
aaaaagaaagaggatgcgctcaataagcgcttaaaagttataaaggataccccgccggcc
aaggcaggtagcggcgcgtccggtaaaaaggatggcaaagaggaggaagcccgagtgctg
ggcgttggcgaagtggttatgggggacagaatcaagcgtccggcccagtccatgggagaa
attgactttagtaccggcgcggtgcttgacagcaccaacatcgtggtcagcggccgggtc
tttggcattgattccagggaaattactgataaaacgaccctttttacctttaacattacc
gatgaacacggcagtgtctcctgtaagattttcgcccggaagaagaatgtgggcatgatc
aaggaaaatctgaaaaaggaccgctggtttaaggttgagggcaatatcaattatgatgag
tactcccacgaaaaggtgctgacacctaaaaatatggaggtggccgcagcgccggtaagg
cgtgacaacgcagaggaaaaacgtgtcgagcttcaccttcacagccagtacagctccatg
gacgcggtgagcaaggtggctaaaattatgaagcaggccaatgattttggtcatgacgcc
atcggtatcactgaccacggcgtgcttcaggcttaccctgaaatgatgtccctgagcaaa
aaatacggcatcaaggtgctgtacggcgtcgagggatatctggtggacgatgaccagtat
attgtaaccggggaacagaacgaaagctttgaaggcgaatttgttttcttcgaccttgag
accactggcctgatcccaggcaaggacaatatcatcgagatcgcagcggtcaagattaaa
aacaagcatatcgtggataccttctccaagatcgtcaacccgcaccgccccattccgccg
tttatcaccaaccttactgggattaccaaccagatggtagaagccggagaggaagaagcg
gcggcggtcagggcctttcatgaattttgcggcgatctcattctggtggcccacaacgca
aaatttgatatgggctttatggagattgcgcttaatgcgcaccatctggagaacaatatc
acctatattgatacactcgccatgtccaggacgctgattccaaccatcaacaagcataac
ctcaaaaagctggcgagttattttaaggtagatatgggacaccaccaccgggctctggac
gactcggtgtgctcggcgaagattttcgtcaagctcatggagctggcccagaaacaggat
gtggatgaggtggccggtctcaacggcctgatggacgtagagcagatcataaaatccggc
gatacctaccatattattatttacgccaaaaatcaggcggggctgaaggacctgtacaag
ctggtttccgaggcgcacatcaattatttttacagaaggcccaggataccgaaatccctg
ctggcagcccaccgggaaaatctgatcatcggcagcgcatgtgaggccggggagctctac
aaggcagtgctgaagaatgtgcccaagaaccgtctggatgaaatcgctgatttttatgat
tattttgaggtacagcctctgggaaataatgaatatctccttcggaatgagaccgtgcac
tccatggaagagctggctgatgttaacaggcggatcattgagcttgggcgggaaaagggc
aagctggtggtcgccaccggggacgtccattttgtggaccccagcgacgcttatttcaga
gagattctgcaggccggacagggctacaaggattcccatgagcagccgccgctctactac
cgctcgacccaggaaatgctggatgaattcacctatgtggacccgcagaccgcctatgag
ctggtggttaccaatccgcgcagggtggcggaactgtttgacgacgtgaagcccataccc
gacggcaccttcccgcccatcattgagggctcggatgatgagatccgggatatggtttat
aaaaaggcccatgagatgtacggtgacccgctgccagacattgtggagcagcgcgtgaag
cgtgagctggactccattatcggcaacggctactcggtcctgtacctgatcgcccagaag
ctggtgcaccattccctggaggatggctatctggtcggttccagagggtcggtcggatcg
tcgctggttgccatgttgtgtgggatcacagaggttaactcactggcgcctcactatgtc
tgcccgaactgcaagcattatgagttctttgacagcacaaaggtaggggtggggcctgac
cttcccaacgccgattgcccggaatgcggccatcccatgaataaggacggctttgatatt
ccctttgaaaccttccttggatttgagggcgacaaggagccggatattgaccttaacttc
tcaggcgaaaaccagccagaggcgcaccattacacagaggtgctctttggcgagggcaag
gtctaccgcgccggaaccattgcaacactggcggataagacagcctttggctatgtgaaa
aatttctttgatgaaaatggtgtcaccgcgccgcgagcagagatggaacgtgtgattgag
ggctgcgccggcgttaagcgtaccacaggccagcaccccggcggggttatggtggtgcca
aaggataaggatatctatgactttacgccgatccagtacccggctgatgaccgggaatgc
ggcaccatgacgacccatttcgattaccactccatttccgggcgtctcctgaagctcgat
attctgggccatgatgacccgaccatgctccgcatgctcaaggatatcacaggcctcgac
ccgcaggagattccgctggacgacgaaaaggtcatcagcctgttcacaggaaccagcgcc
ctggacctgaaggaagatgattttgacattcctcttggaacctgcgggattccagagttt
gggaccaactttgtccgccagatggtgctggacaccaagcccacggccttttcggacctg
atccgtatttctggcttatcccacgggacagacgtctggaccaacaacgctcaggacctt
gtgcgttctggaaccgcgaccatcaaggatgttatctgtacccgtgacgatattatgctt
ggcctcatctcaatgggactggcgcccaaggagtccttcagtattatggagcatgtccgt
aaggggaagggcctgacagatgaagaggaagcttatatgaaggaaaacaatgtgccggcc
tggtacattgattcctgtaaaaagatcaagtacatgttccctaaagcccacgcggcagct
tatgttatgatggcctttcgtatcgcttactacaaggtttactatccactggcctactac
gcgacctacttcagtatccgggccaaggaatttaatctggaaaagatgaccaacggtaag
gagacggtcaaaaaaacattggcggaaatccgcgcccagggcaacaaggccagcaataag
gaccagcagcttctgacctcgctggagttggcgcttgaaatgtactgccgtggctttggc
tttaaaaatgtggatgtctacgagtcccactacagcgagttcaaaatcgttggaaacgag
ctgctgccaccgcttaacgccattgacggactgggggacaaggcggcaatgcagatttac
gaggaagctcagaaacggccctttatctccaaagaggatctgcagacccgcgccaaggtc
aataaatccaacatcgaaaagctcgagcagttcggctgcctgaacagtctgccggactcc
aaccagatgagctttatgagtatgttttaa
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