Eubacterium maltosivorans: CPZ25_011125
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Entry
CPZ25_011125 CDS
T05996
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
emt
Eubacterium maltosivorans
Pathway
emt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
emt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPZ25_011125 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emt03021
]
CPZ25_011125 (rpoC)
03400 DNA repair and recombination proteins [BR:
emt03400
]
CPZ25_011125 (rpoC)
Enzymes [BR:
emt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPZ25_011125 (rpoC)
Transcription machinery [BR:
emt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPZ25_011125 (rpoC)
DNA repair and recombination proteins [BR:
emt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPZ25_011125 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QCT71857
UniProt:
A0A4P9C8M9
LinkDB
All DBs
Position
complement(2304812..2308564)
Genome browser
AA seq
1250 aa
AA seq
DB search
MLNEEFTFKSLQIGLASPEKIREWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWE
CNCGKYKRIRHKGIVCENCGVEVTKAKVRRERMGHIELASPVSHIWYFKGIPSRMGLILE
MSPRNLEKIIYFASYVVTDPGETPLQYKQVLSETEYKEAKANYGKDFTAGIGAEAIQELL
KMVDLDQEAAVLKEELKDSSGQKKIRVARRLEAIEAFRNSHNKPEWMIMEAIPVIPPELR
PMVQLDGGRFATSDLNDLYRRVINRNNRLIKLLELDAPDIIVQNEKRMLQEAVDALIDNG
RRGRAVTGPGNRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMAIELFKPFVMRELVARQLSQNIKSAKKMVEKLDPIIWDVLEDVIHEHPVLLNRAPTLH
RLGIQAFEPILVEGRAIKLHPLACTAYNADFDGDQMAVHVPLSVEAQAEARFLMMACNNI
LKPQDGTPVVVPSQDMILGSYYMTLYKEDAKGTGSIFCDMNELEMAYFNHDVELHAKVKV
RTTKEINGESYTRLVESTVGRFIFNQILPQDMGFVKRETIDDHFKLEVDMQVDKKVLTKI
VDRCFKAHGPTITSETLDEIKRLGYKYSTQAAITVGVADMQVPGNKEEILARADEKIAKN
LKLFRRGLISEEERYQNVVDIWNNATDEVTDALLSHLDRLNPINMMADSGARGSKNQIRQ
LAGMRGLMTNPTGRVIELPIRSNFREGLNVLEFFSSTHGARKGLADTALRTADSGYLTRR
LVDVSQDVIVREEDCGTTRGYEVTAINEHGEVIEDLAERIEGRYAFEDVVHPETGEIMAH
KDEVITSDQAEAIQEAGVEKVVIRAVFNCNSKYGVCKKCYGVDMTSWKPVEIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVEELFEARKPKGQAIISEIAGRVEILE
GKKTEAVVTAPDGESRIYLIPYGSRLKVHTGDKIEAGQEITEGSINPNDILRIKGIDAVQ
QYLLSEVQKVYRLQGVHISDKHIELIIRQMLRKVKIENAGDTDLITGALTDIFEMEEKNN
EALDMGLEPAQASRELLGITKASLATDSFLSAASFQETTRVLTDAAIKGKVDPLIGLKEN
VIIGQLVPAGTGVKAYSRVELDYDREDEDDEEEELIDDMIKDDITNVKELSDDMDIVMDD
DNILAKAVQEERENLEKDDELAKAFDMFDMDFLDNSSSEASDMIIGDLDD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatgaagaatttacctttaagtcgttgcaaattggattagcatcacctgaaaaa
atcagagagtggtctcggggtgaggttaaaaaacccgaaaccattaattacagaaccctg
aaaccggaaaaagaaggtcttttctgtgaaaaaatcttcggaccaaccaaagactgggag
tgtaactgtggtaaatacaagcgtattcgccataagggcatcgtctgtgaaaactgtggt
gttgaagtaacaaaagcaaaagtaagaagagaacggatggggcacatcgagcttgcctca
cccgtatcacatatctggtatttcaaggggattccaagccgtatgggcctgatccttgaa
atgtcaccccgtaatcttgaaaaaattatctattttgcctcttatgtggtaacggaccca
ggcgaaaccccgcttcagtacaagcaggtgctgtccgaaaccgaatataaggaagcgaaa
gccaactatggcaaggactttactgccggcattggtgcggaagccattcaggagctcctg
aagatggtggatctggatcaggaagccgctgtgctgaaggaagaactcaaggacagctcc
ggccagaagaagattcgtgtggccagacgtctggaagccattgaagctttcagaaattcc
cacaataagccggaatggatgatcatggaagccatcccggttattccgccggaactgcgg
ccaatggtacagctggacgggggacgttttgcgacctcagacctgaacgacctgtaccgc
cgtgtgatcaaccgtaacaaccgtctgatcaagctgctggagctggatgcgccggacatc
attgtccagaatgaaaagcgtatgctgcaggaagcagtcgatgccttgattgacaatggc
cgacgcggccgtgcggtcactggcccgggtaaccgtcctttcaaatccctgagtgatatg
cttaaggggaaacaggggcgtttccgtcagaaccttctcggtaaacgtgtcgactactct
ggccgttccgttatcgttgttggtcctgagctcaaaatgtaccagtgcggtctgccgaag
gaaatggccatcgagctgttcaagcctttcgttatgcgtgagctggttgcgagacagctg
tctcagaacatcaagagcgccaagaaaatggtcgaaaaactcgatccgattatctgggac
gttctggaagatgtcattcacgaacatccggtgctcttaaaccgtgcacctacactccat
agactgggaatccaagcctttgaaccgattctggttgaaggccgtgccatcaagctccat
cccttggcctgtaccgcgtacaacgccgacttcgacggtgaccagatggccgtccacgtg
ccgctgtctgtagaggctcaggcagaagcccgattcttaatgatggcctgcaacaatatt
ctgaaacctcaggatggtacgccggttgtcgttccttcacaggatatgatcctcggttcc
tactatatgacgctttataaagaagacgccaaaggaaccggttccattttctgtgatatg
aacgagctggaaatggcgtatttcaaccacgacgttgagcttcacgccaaggttaaggtc
cgtaccaccaaagaaattaatggtgaaagctatacccgtctggtggaaagcaccgtcggt
cgtttcattttcaaccagattctgccgcaggacatgggctttgtgaaacgtgaaaccatt
gatgatcactttaaactggaagtggatatgcaggttgacaaaaaagtactgaccaaaatt
gtcgaccgctgttttaaggctcacggccccacaattacttccgaaaccctcgatgagatc
aagcgtctgggctataaatactctacccaggccgccatcaccgttggtgttgccgacatg
caggtgccaggaaacaaggaagaaattctcgcccgtgccgatgaaaagatcgccaagaac
ctcaagctgttccgccgtggtctcatttctgaagaggaacgttaccagaacgttgtcgat
atctggaacaacgctaccgatgaagtaaccgacgcgctgttaagccatctggaccgactg
aacccaatcaacatgatggccgattccggtgcccgtggttccaagaaccagattcgtcag
ttggcgggcatgcgtggtcttatgaccaacccgaccggccgtgtcatcgagctgccaatc
cgttccaacttccgtgaaggtctgaacgtactcgagttcttctcctccacccatggtgcc
cgtaaaggtcttgccgatacggccctgagaacagcggactccggttacctgacccgtcgt
cttgtcgacgtcagccaggacgttatcgtccgtgaggaagactgcggaaccacccgtggt
tatgaggtaacagccatcaatgaacatggcgaggtcattgaagatctggccgaacgtatt
gaaggccgttacgccttcgaggatgttgtgcatcctgaaaccggggaaattatggcccat
aaggacgaagtcatcaccagcgaccaggcagaagccattcaggaagccggtgttgaaaaa
gttgttatccgcgctgtattcaactgtaattccaaatacggtgtctgtaaaaaatgctat
ggtgtcgatatgaccagctggaaacctgtcgaaatcggtgaagcggttggcatcattgcc
gcccagtccatcggtgaaccgggtacccagttaaccatgcgtaccttccataccggcggg
gttgcatccgcggacgacatcacccagggtctcccccgtgtcgaagaactttttgaagcc
cgtaagccaaagggacaggctattatttcagaaatagctggccgtgtcgagattctggaa
ggcaagaaaaccgaagcagttgtcactgcgccagacggtgaatccagaatttacctgatt
ccttacggctcacgcttaaaggtacataccggcgataaaatcgaagccggccaggaaatc
accgaaggttccatcaatccgaatgatatcctgcgcatcaagggcatcgacgcggtacag
cagtatctgttgtccgaagtgcagaaagtataccgtctgcagggggtacacatcagcgat
aagcatatcgagctgatcatccgacagatgctgcgtaaggttaagattgaaaatgccgga
gataccgacctgatcaccggggccttaaccgatatttttgaaatggaagaaaagaacaac
gaagctctggatatggggctggaaccggcacaggccagcagagagctccttgggatcact
aaggcatctctggcaacggattccttcctgtccgcggcatccttccaggaaaccactcga
gtgctcaccgacgctgccatcaagggcaaggtcgatccacttatcggtctaaaggaaaat
gtcattatcggccagctggtgcccgccggaaccggcgtcaaggcttacagccgcgtcgag
cttgactatgaccgcgaggatgaggatgatgaggaagaagaactgattgatgatatgatc
aaagacgatatcacgaatgtgaaggagctttccgacgacatggatattgtcatggatgat
gataacatcttagccaaggctgttcaggaagaacgcgaaaaccttgaaaaggacgatgaa
ctggccaaggcctttgatatgttcgacatggatttcttagacaacagcagcagtgaagcc
agcgatatgattattggagatcttgacgactaa
DBGET
integrated database retrieval system
